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Cancer Research 66, 11187, December 1, 2006. doi: 10.1158/0008-5472.CAN-06-1274
© 2006 American Association for Cancer Research

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Molecular Biology, Pathobiology, and Genetics

Epigenetic Silencing of Novel Tumor Suppressors in Malignant Melanoma

Viswanathan Muthusamy1, Sekhar Duraisamy2, C. Matthew Bradbury1, Cara Hobbs1, David P. Curley1, Betsy Nelson1 and Marcus Bosenberg1

1 Department of Pathology, University of Vermont College of Medicine, Burlington, Vermont and 2 Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts

Requests for reprints: Marcus Bosenberg, Department of Pathology, University of Vermont College of Medicine, 323 Health Science Research Facility, 149 Beaumont Avenue, Burlington, VT 05405. Phone: 802-656-0309; Fax: 802-656-8892; E-mail: marcus.bosenberg{at}uvm.edu.

Malignant melanoma is a common and frequently lethal disease. Current therapeutic interventions have little effect on survival, emphasizing the need for a better understanding of the genetic, epigenetic, and phenotypic changes in melanoma formation and progression. We identified 17 genes that were not previously known to be silenced by methylation in melanoma using a microarray-based screen following treatment of melanoma cell lines with the DNA methylation inhibitor 5-Aza-2'-deoxycytidine. Eight of these genes have not been previously shown to undergo DNA methylation in any form of cancer. Three of the genes, QPCT, CYP1B1, and LXN, are densely methylated in >95% of uncultured melanoma tumor samples. Reexpression of either of two of the silenced genes, HOXB13 and SYK, resulted in reduced colony formation in vitro and diminished tumor formation in vivo, indicating that these genes function as tumor suppressors in melanoma. (Cancer Res 2006; 66(23): 11187-93)




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