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Tumor Biology |
Departments of Pathology [G-S. Y., H. L., Y. J., E. Y., I. L.], Internal Medicine [H-B. M.], and Biochemistry [K. S.], University of Ulsan College of Medicine and Asan Institute for Life Sciences, Seoul, Korea
| ABSTRACT |
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| INTRODUCTION |
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Depending on cell types, nuclear matrix proteins may vary considerably. Although the majority are common in most cell types, certain proteins have been reported to be specific for particular cell types (3, 4, 5, 6) . Furthermore, it was reported that transformed cells with high metastatic potential displayed altered nuclear matrix protein profiles (7) . Thus, it was suggested that a group of nuclear matrix proteins was exclusively expressed or "recruited" in association with malignant transformation or other related cellular changes.
Using two-dimensional gel electrophoresis, we analyzed the nuclear matrix protein profiles of human HCCs3 and compared them with corresponding non-neoplastic liver tissue. Several proteins were noted predominantly in carcinomas: unexpectedly, one of them was identified as calreticulin. Here we report that a fraction of cellular calreticulin participates in the formation of the nuclear matrix in HCCs and other carcinoma cell lines.
| MATERIALS AND METHODS |
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Hep3B, HepG2, HeLa, and EJ cells were grown in DMEM with 10% FCS. Cultures were incubated at 37°C and 4% CO2 in 75 cm2 tissue culture flasks. Cells were harvested when they reached 50% confluence.
Preparation of Nuclear Matrix Proteins.
Nuclear matrix proteins were prepared essentially according to Fey and
Penman (3)
. Briefly, the sample was minced in PBS and
washed with PBS three times. It was resuspended and homogenized in
buffer A [10 mM PIPES (pH 7.0), 50 mM NaCl,
300 mM sucrose, 3 mM
MgCl2, 1 mM EGTA, 1.2 mM
phenylmethylsulfonyl fluoride, 2 mM vanadylribonucleoside,
and 0.5% Triton X-100]. The homogenate was filtered through four
layers of cheesecloth and was spun down at 1000 x g for 10 min at 4°C. The pellet was resuspended in buffer
B (100 µg/ml DNase I added to buffer A) for 45 min at 25°C and
centrifuged at 1000 x g for 10 min at 4°C.
The pellet was resuspended in buffer C (250 mM
ammonium sulfate added to buffer A), stirred in cold room for 10 min,
and centrifuged at 1000 x g for 10 min at
4°C. The pellet was resuspended in buffer A. While it was stirred at
4°C, 4 M stock solution of NaCl was added
slowly until the final concentration of NaCl reached 2
M. After 10 min of incubation, it was centrifuged
at 1000 x g for 10 min. The pellet, which
represented a crude nuclear matrix fraction containing intermediate
filament proteins as well, was applied to two-dimensional gel
electrophoresis.
Nuclear matrix proteins of cultured cells were prepared similarly. After washing with PBS, harvested cells were resuspended in buffer A and homogenized in a loose-fit glass-to-glass homogenizer. After centrifugation, the supernatant was collected as "total soluble cytoplasmic protein fraction." The pellet, a "total crude nuclear protein fraction," underwent further extraction procedures as above. To see the effect of Ca2+ on the extraction, the procedures were repeated with the same buffers but without EGTA.
Two-Dimensional Gel Electrophoresis.
Two-dimensional gel electrophoresis was carried out essentially
according to OFarrell (8)
. Nuclear matrix fractions were
applied to a lysis buffer [9.8 M urea, 2% (w/v) NP40, 100
mM DTT, and 2% Ampholine (pH 79; Pharmacia Biotech,
Piscataway, NJ)] and were applied to isoelectric focusing. The
tube gels were extracted and applied to 10% SDS-PAGE. Slab gels were
fixed and stained with Coomassie Blue. For normalization of the loaded
proteins, the amount of cytokeratin in the crude nuclear matrix
fraction was measured by densitometry and used as a standard.
NH2-Terminal Sequencing.
For NH2-terminal amino acid sequencing, peptides
were transferred to Immobilon membranes (Hoefer Scientific, San
Francisco, CA). After staining with Coomassie Blue, the
candidate peptide was cut out. The amino acid sequencing by Edman
degradation method was carried out at the Korean Basic Science
Institute (Daeduk, Korea).
Amino Acid Sequence Analysis.
The nonredundant protein sequence database at the National Center for
Biotechnology Information (NIH) was searched for homology using the
BLASTP program. For the prediction of coiled-coil structure, the amino
acid sequence of calreticulin was analyzed using the Network Protein
Sequence analysis supplied by Pôle Bio-Informatique
Lyonnais (Lyon, France; Ref. 9
).
Immunoblotting.
Proteins were separated by SDS-PAGE and then transferred to
nitrocellulose membranes. For immunoblotting, a rabbit
anticalre-ticulin antibody (StressGen, Victoria, British Columbia,
Canada) was applied in 1:500 dilution. Then membranes were
applied to either the nitroblue tetrazolium/5-bromo-4-chloro-3-indolyl
phosphate color reaction system (Boehringer-Mannheim, Mannheim,
Germany) or the enhanced chemiluminescence system (Amersham,
Buckinghamshire, England).
Immunofluorescence Microscopy.
Four-µm-thick frozen sections were made from every malignant and
normal tissue. They were fixed in cold acetone at -20°C for
10 min and then anticalreticulin antibody was applied at 1:500
dilution. For a negative control, a nonimmune rabbit serum was applied.
For simultaneous DNA staining, 4',6-diamino-2-phenylindole (Sigma, St.
Louis, MO) was applied before mounting.
Cultured cells were similarly studied for calreticulin expression. Cells were grown on coverslips to 50% confluence and were washed in PBS. They were fixed in cold methanol at -20°C for 10 min and then were processed similarly.
| RESULTS |
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To confirm the presence of calreticulin, the nuclear matrix fractions
of carcinomas and normal liver tissues were immunoblotted with an
anticalreticulin antibody. Calreticulin was confirmed to be one of the
major components of the nuclear matrix proteins in carcinomas; however,
it was minimal or barely detectable in nuclear matrix fractions of
normal liver (Fig. 2)
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The detection of calreticulin in the nuclear matrix fraction might have
represented an "incomplete extraction" of calreticulin if it was
abundant in the carcinomas particularly. To analyze such a possibility,
the total calreticulin contents in the samples were compared. Sample
buffers containing the same amount of carcinoma and normal liver tissue
samples were loaded in the SDS-PAGE and transferred to a nitrocellulose
paper. Upon immunostaining with an anticalreticulin antibody, the
relative intensity of calreticulin immunoreaction was not increased in
carcinomas (Fig. 3)
. On the contrary, it appeared to be slightly less in carcinomas than
in normal tissues; however, the difference was not considerable.
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Nuclear immunostaining for calreticulin was noted in Hep3B and HeLa
cells as well (Fig. 4, C and D)
. The nuclear
staining was either patchy or diffuse. Compared with those cells, the
nuclear staining was rather weak and ambiguous in EJ and HepG2 cells.
Calreticulin in the Nuclear Matrix of Various Cells.
Nuclear matrix proteins of HepG2, HeLa, and EJ cells were immunoblotted
with an anti-calreticulin antibody. Calreticulin was particularly
abundant in the nuclear matrix of HeLa, whereas the amounts were much
smaller in EJ and HepG2 (Fig. 5A)
. However, it was difficult to compare the amounts directly
because the pellets of nuclear matrix of HeLa tended to be larger than
those of EJ and HepG2 after the extraction process. Interestingly, the
calreticulin immunoreactivity was frequently noted as two separate
bands (which apparently were Mr 62,000
and 64,000 in our gel system), particularly in EJ and HepG2. It did not
appear to represent a proteolytic degradation in the procedures because
it was noted in total tissue or cell preparations quite often (data not
shown).
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Prediction of Coiled Coil in Calreticulin.
When the amino acid sequence of calreticulin was analyzed with
the window at 28 amino acids (9)
, a segment (amino acid
residues 350408) at the COOH terminus predicted a virtual coiled coil
(Fig. 6)
. It encompassed about 14% of the entire amino acid sequence of
calreticulin.
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| DISCUSSION |
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Calreticulin is a highly acidic protein that moves aberrantly at about Mr 60,00065,000 on SDS-PAGE, although the deduced Mr from the amino acids is 46,000 (10 , 17 , 18) . Because it is an abundant protein with unusual physicochemical characteristics, the possibility of an inadequate extraction or an artifact in the procedure should be considered. However, such a possibility is very unlikely. Under the same extraction procedures, calreticulin was consistently found in the nuclear matrix fractions of carcinomas, whereas in the nuclear matrix fractions of normal liver tissue (which had the same amount or even more total calreticulin) it was minimally present. Furthermore, by immunofluorescence microscopy, it was evidently present in the nuclei of HCCs, whereas normal hepatocytes did not display convincing nuclear staining. Thus, it was concluded that calreticulin was indeed present in the nuclei and that a fraction of nuclear calreticulin was a component of the nuclear matrices of HCCs.
The prediction of a segment of virtual coiled coil also supports the notion that calreticulin might function as a structural protein in the nucleus. Although the predicted coiled coil is not as long as those of known filamentous proteins such as intermediate filaments or lamins, calreticulin may interact with other nuclear proteins with coiled-coil domains, depending on the microenvironmental situation. Because only a small fraction of nuclear calreticulin is detected in the nuclear matrix fraction, such a possibility appears to be high.
The intracellular localization of calreticulin has been a
controversial issue. In addition to being a calcium reservoir in the
endoplasmic reticulum, calreticulin has important gene-regulating
functions. It has been suggested that the regulatory functions of
calreticulin are manifested by direct binding to a common amino acid
sequence motif KXFFKR (where X is either G, A, or V) at the DNA binding
domain of all steroid receptors or to a homologous motif KXGFFKR of the
cytoplasmic domains of all integrin
subunits
(12, 13, 14)
. If it regulated the hormonal receptor
functions by blocking their binding sites to DNA directly, it would be
expected to be at the very site of DNA binding, i.e., the
nucleus.
Calreticulin has a hydrophobic leader sequence at the NH2 terminus and the KDEL motif at the COOH terminus, which are characteristic for proteins retained in the endoplasmic reticulum (19) . However, a putative nuclear localization signal, -PPKKIKPDP-, is present at residues 187195 as well. It would be compatible with the notion of direct interaction of calreticulin with hormonal receptors in the nucleus. On the contrary, it was shown that only the "endoplasmic reticulum form" of calreticulin had regulatory functions of hormonal receptor-mediated gene expression (20) .
Results of immunofluorescence studies have been controversial as well. In early studies, positive nuclear immunostaining was reported (21 , 22) . However, in a subsequent study using isolated rat hepatocytes, no nuclear staining was observed (20) . Indeed it was not incompatible with our observation because convincing nuclear staining was observed only in the malignant cells and not in normal hepatocytes. Thus, it could be concluded that calreticulin was able to get into the nucleus under certain cellular conditions, including malignant transformation. The "intranuclear translocation" of calreticulin appeared to be a strictly regulated biological phenomenon.
The nuclear matrix is a highly dynamic structure that may be formed or modified readily according to the microenvironment. Recently, it has been reported that a fraction of Ku, a DNA-binding protein, was present in the nuclear matrix as well as in the "soluble" fraction (23) . Thus, it is not unprecedented that a fraction of a "soluble" protein like calreticulin may participate in the formation of the nuclear matrix, depending on the biological conditions.
The nuclear matrix of calreticulin may not be restricted to hepatic tissue or specific for a malignancy. Calreticulin may still be detectable, although in a much lower amount, in the nuclear matrix fractions of normal tissues. If calreticulin were indeed in the nuclear matrix normally, such a phenomenon appears to be augmented considerably during the malignant transformation. Otherwise, the presence of calreticulin in the nuclear matrix may be related to the "activated cell growth" in general. In this context, it is of note that the expression of calreticulin is increased in T lymphocytes as they are activated (24) .
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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1 Supported by funding for basic medical sciences
from the Ministry of Education (1997-146) and by Grants 1997-7 and
1998-7 from the Asan Institute for Life Sciences. ![]()
2 To whom requests for reprints should be
addressed, at Department of Pathology, University of Ulsan College of
Medicine, 388-1 Poongnap-Dong, Songpa-Gu, Seoul 138-736, Korea. Phone:
82-2-2224-4551; Fax: 82-2-472-7898; E-mail: iclee{at}www.amc.seoul.kr ![]()
3 The abbreviations used are: HCC, hepatocellular
carcinoma; pI, isoelectric point. ![]()
Received 4/ 5/99. Accepted 12/14/99.
| REFERENCES |
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