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Advances in Brief |
Department of Pathology [A. v. B., G. J. M.], Department of Medicine, Division of Medical Oncology [M. V-G.], and DNA Sequencing & Analysis Core [C. K.], University of Colorado Health Sciences Center, Denver, Colorado 80262
| ABSTRACT |
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| Introduction |
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We have previously reported on the common origin of several prostate carcinoma cell lines (7 , 8) . In van Bokhoven et al. (7) , TSU-Pr1 and JCA-1 cells were shown to have originated from the same individual. TSU-Pr1 and JCA-1 are frequently used as prostatic carcinoma models. TSU-Pr1 was originally described in 1987 as having been derived from a prostate carcinoma lymph node metastasis (9) , and JCA-1 was described in 1990 as having been derived from a primary prostate carcinoma (10) . Identical p53 and Ha-ras mutations in these two cell lines and in a third cell line, T24, prompted us to investigate the possibility that all three are related. The T24 cell line was established in 1970 from a urinary bladder carcinoma (11) . We used cytogenetics and DNA profiling to compare the chromosomal and genetic background of T24 cells with those of TSU-Pr1 and JCA-1 cells. We discovered that TSU-Pr1 and JCA-1 cells, originally believed to be of prostatic origin, are actually derivatives of the bladder carcinoma cell line T24.
| Materials and Methods |
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Cytogenetic Analysis.
Cells were blocked in metaphase with Colcemid (0.05 µg/ml) for 12 h
before hypotonic swelling in a 4:1 mixture of 0.075 M KCl
and 1% sodium citrate. Fixation was done using a 3:1 mixture of
methanol and glacial acetic acid. Slides were prepared and G-banded
according to a standard protocol (7
, 8) , except that
chromosomes were stained with Leishmans stain. Metaphase chromosomes
were digitally imaged and karyotyped with a CytoVysion System (Applied
Imaging, Santa Clara, CA).
M-FISH4
was performed on TSU-Pr1 and JCA-1 cells as described previously
(7
, 8) . The T24 cell line was examined by SKY. The
SKY probe mixture and hybridization reagents were prepared by Applied
Spectral Imaging (Carlsbad, CA). A combinatorial labeling of five
fluors, FITC, Texas red, rhodamine, Cy5, and Cy5.5, was used to
generate the 24 colors. Image acquisition was performed using a SD200
Spectracube (Applied Spectral Imaging) coupled to an Olympus BX60
epifluorescence microscope and a custom optical filter (SKY-1; Chroma
Technology, Brattleboro, VT). Analysis was performed using SKYView v1.6
software (Applied Spectral Imaging). In both M-FISH and SKY assays, at
least 10 metaphase spreads were completely karyotyped for each cell
line, and abnormalities were listed as clonal when present in at least
two cells. Karyotypes were interpreted according to the International
System for Human Cytogenetics Nomenclature guidelines
(12)
. The positions of the chromosome breakpoints were
assigned, when possible, based on inverted
4',6-diamidino-2-phenylindole images and/or on the G-banding results
obtained previously.
Mutation Analysis.
The exon 59 region of p53 was amplified by reverse transcription-PCR
with primers 5'-CAGCACATGACGGAGGTTGT-3' and
5'-GGAGAGGAGCTGGTGTTGTTG-3'. The area spanning codon 12 of
Ha-ras was amplified from genomic DNA using primers
5'-CCTGGGCCTGGCTGAGCAG-3' and 5'-ACCATGCAGGGGACCAGGG-3'. The cycling
conditions were described previously (7)
. The primers used
for PCR were also used for direct sequencing of PCR products.
DNA Profiling Analyses.
The AmpFlSTR Profiler Plus kit (Applied Biosystems, Foster
City, CA) was used for DNA profiling analysis according to the
manufacturers instructions. This PCR-based kit uses primers labeled
with different fluorophores (5-FAM, JOE, and NED) to amplify
nine Short Tandem Repeat markers and a gender marker in a single
reaction tube. The markers (and their chromosomal locations) included
in our analysis were D3S1358 (3p), vWA (12p12-pter), FGA (4q28),
D8S1179 (8)
, D21S11 (21)
, D18S51 (18q21.3), D5S818 (5q2131), D13S317
(13q2231), D7S820 (7q), and amelogenin (X, Y). The amplicons were
analyzed on an ABI 377 DNA Automated Sequencer using GeneScan version
3.1 (Applied Biosystems).
| Results |
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TAG, tyrosine
stop (16
, 17)
] in T24
cells was confirmed using reverse transcription-PCR, and the
Ha-ras mutation [codon 12 GGC
GTC, glycine
valine
(18)
] was confirmed by PCR using genomic DNA as input. We
have described previously that these mutations occur in both TSU-Pr1
and JCA-1 cells (7)
.
DNA profiling using genomic DNA from the three cell lines was
performed. As we described earlier, the DNA profile of JCA-1 cells is
identical to the profile of TSU-Pr1 cells (7)
. Fig. 2
shows that, in addition, these DNA profiles are identical to that of
T24 cells.
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| Discussion |
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In our previous report (7) , we assumed that JCA-1 cells had originated from TSU-Pr1 cells. In that scenario, it was difficult to explain the absence of a normal chromosome 15 in TSU-Pr1 cells and its presence in JCA-1 cells. This controversy no longer exists because it is now apparent that both cell lines originated independently from T24 cells, which contain apparently normal copies of chromosome 15. In the original description, prostate-specific antigen expression was identified in JCA-1 cell xenografts (10) . However, this feature was rapidly lost in vitro. The most plausible explanation for these findings is that the xenografts still contained prostate carcinoma cells that were rapidly overgrown by T24 cells in vitro. No mention was made of prostate-specific antigen production by TSU-Pr1 cells in the original description of this cell line (9) .
The p53 mutation that we detected in codon 126 (TAC
TAG)
in TSU-Pr1, JCA-1, and T24 cells is uncommon. In addition, it has only
been reported in a squamous cell carcinoma of the head and neck, in the
cell line (HOC605) derived from this tumor, and in the bladder
carcinoma cell line BT-1 (17)
. Comparison of the published
BT-1 (19)
karyotype with our T24 karyotype reveals several
possible similarities indicating that BT-1 cells might also be a
product of T24 contamination. No karyotype has been published for
HOC605 cells.
T24 is recognized to have been the source of contamination in numerous cases. Most of these (EJ/MGH-U1, MGH-U2, Hu456, Hu549, Hu961T, HCV29Tmv, and Hu609Tmv) were already accredited to a bladder origin and subsequently identified as cross-contaminants from T24 (20, 21, 22) . Additional cell lines from other organ sites (ECV304, HAG, RAMAK-1, and GHE) have also been identified as cross-contaminants from T24 (6) . ECV304, the most frequently used cell line in endothelial research, was first described in 1990 as a spontaneously transformed and immortalized human endothelial cell line (23) . However, in 1999, it was found to be the result of cross-contamination by T24 cells (6) . The Medline database currently contains more than 250 publication entries using this cell line, more than 60 of which have appeared after the initial report indicating that ECV304 cells were actually T24 bladder carcinoma cells. Less than half of these reports correctly describe ECV304 as a derivative of T24, whereas the rest of the reports do not mention this fact. Whereas for some research it might not be critical whether the cell line is of bladder or endothelial origin, scientific progress hinges on accurate information. Interestingly, some reports mention the fact that the ECV304 cell line is a subclone of T24 cells but still use the ECV304 cell line as an endothelial model. Although T24 might have some endothelial characteristics, it is probably not the best endothelial model available (24) . There are even older examples of cell lines that have been identified as cross-contaminants and are still in use under the wrong identity. For example, in 1967, KB cells, which had been believed to be derived from an epidermoid carcinoma, were identified as HeLa cross-contaminants by Gartler (2) , a finding subsequently confirmed by others (3 , 4) . Still, hundreds of publications have since appeared (some dated as recently as 2001) in which KB cells have been used as an epidermoid carcinoma cell line.
TSU-Pr1 cells and, to a lesser extent, JCA-1 cells are frequently used as prostate carcinoma models. A recent Medline search identified more then 150 reports using these cells. Even our own laboratories have used them until recently as prostate carcinoma cells. The fact that bladder and prostate cells have the same embryological origin may make some findings obtained using bladder carcinoma cells applicable to prostatic adenocarcinoma cells. However, in other studies in which TSU-Pr1 or JCA-1 cells were incorrectly assumed to be of prostate carcinoma origin, conclusions regarding prostate carcinogenesis could be highly questionable.
This report accentuates the need for a definitive solution to the cell culture cross-contamination problem and the associated difficulties in dissemination of this information. Although reports in the past have suggested suitable solutions for these problems (5 , 25 , 26) , they have never been widely implemented. We concur with Stacey et al. (27) , who stated in a recent letter to Nature that this important problem requires urgent attention. DNA profiling has proven to be an easy, accurate, and economical method for cell line identification (6 , 7 , 26) . Development of an online reference database for cell line characteristics, including DNA profiles, would make it easier for individual researchers to check the authenticity of their cells. Publications on new cell lines should always include a DNA profile of the cell line next to a profile of source DNA. The need to collect this information immediately, as well as archive the original DNA, is emphasized by our inability to obtain tissue from the patients reported to be the origins of TSU-Pr1 and JCA-1. Furthermore, it would be highly preferable for new cell lines to be submitted to culture collections like the American Type Culture Collection and the German Collection of Microorganisms and Cell Cultures (DSMZ) for independent authentication and further distribution to the scientific community. Cross-contaminants must be clearly identified in catalogues of culture collections to prevent their incorrect use. For most research, it would be preferable to use the original cell line instead of the cross-contaminant. However, occasionally, the subline may have acquired certain phenotypic characteristics that make it interesting. In these cases, it should be properly mentioned that a cross-contaminant has been used, and the cell and tissue of origin should be clearly stated. Stacey et al. (27) suggested the inclusion of the name of the cell line from which it originated, in addition to the "official" cell name. For the cross-contaminants identified in our study, we suggest the following designations: TSU-Pr1(T24) and JCA-1(T24) bladder carcinoma cells.
Applying these guidelines might eventually solve the problem; however, past experience indicates that the chances of that occurring are extremely low. Meanwhile, researchers, reviewers, and funding agencies need to become fully aware of this problem and the impact it could have on research. Without action, research findings obtained using cell lines under false identities will continue to pollute the scientific literature. The estimated 2030% cross-contaminant cell lines in use are undoubtedly responsible for numerous misleading publications. This misinformation can potentially have a very high cost in terms of invalid hypotheses and paradigms, misspent effort, and protracted development of patient treatments.
In summary, the TSU-Pr1 and JCA-1 cell lines appear to be derivatives of the T24 bladder carcinoma cell line. Although each has properties that could make it useful in tumor biology research, it is clear that they can no longer be used as models for the study of prostate cancer.
| FOOTNOTES |
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1 Supported in part by USPHS Grants CA-53520 and
CA-84269 and Department of Defense Grant DAMD17-00-1-0047 (to
G. J. M.) and by USPHS Grant CA-46934 to the University of Colorado
Cancer Center for support of the Cytogenetics and the DNA Sequencing
and Analysis Core Laboratories. ![]()
2 To whom requests for reprints should addressed,
at University Colorado Health Sciences Center, Department of Pathology,
B216, 4200 East 9th Avenue, Denver, CO 80262. Phone:
(303) 315-0300; Fax: (303) 315-6761; E-mail: adrie.vanbokhoven{at}uchsc.edu ![]()
3 This work was completed before the untimely
death of Gary J. Miller on May 25, 2001. He will be greatly missed by
family, friends, and colleagues. ![]()
4 The abbreviation used is: M-FISH, multiplex
fluorescence in situ hybridization; SKY, spectral
karyotyping. ![]()
Received 6/11/01. Accepted 7/17/01.
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