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Carcinogenesis |
Department of Medicine and Cancer Center, University of California at San Diego, La Jolla, California 92093-0688, and the Research Service of San Diego VA Medical Center, San Diego, California 92161
| ABSTRACT |
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| INTRODUCTION |
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The human genome is well protected against mutagenesis because of the existence of several DNA repair systems. Over the past several years, the mechanisms underlying many of these processes have been identified. The MMR system has been found to ensure DNA fidelity by correcting newly acquired mutations after DNA replication immediately before mitosis. The MMR system requires cooperation of several protein components, which can recognize and remove DNA mismatches that may occur in the newly synthesized DNA strand.
Insertion/deletion loops are most likely to occur in repetitive DNA sequences called microsatellites. Microsatellites are widely dispersed throughout the eukaryotic genome, primarily within noncoding regions but occasionally within coding regions. Many microsatellites are highly polymorphic throughout the population. They serve as valuable markers in genetic mapping, identity testing, and genetic linkage analysis. About half of the hereditary nonpolyposis colorectal cancer families have been linked to germ-line mutations in the DNA MMR genes hMSH2 and hMLH1 (2, 3, 4, 5) . Most tumors in patients with hereditary nonpolyposis colorectal cancer display MSI, which is considered a fingerprint of MMR deficiency (6) and the mutator pathway (7 , 8) .
MSI has also been detected in colorectal cancer samples from patients with ulcerative colitis (9) . There are two forms of MSI, which have different implications. High frequency of MSI, referred to as "MSI-H," is found when the DNA MMR system is totally inactivated by mutation or hypermethylation of the hMLH1promoter. MSI-L (10) has been found not only in the tumors themselves but also in chronically inflamed nonneoplastic colonic tissue (11) . Silencing of hMLH1expression by promoter hypermethylation was recently reported in about half of ulcerative colitis-associated tumors that displayed MSI-H, but in only one-sixteenth of the MSI-L tumors (12) . hMLH1promoter hypermethylation may partially explain the pathway by which MSI-H arises in such tumors, but the mechanism that accounts for MSI-L is still undetermined and is due to neither mutational inactivation nor promoter silencing of any of the major DNA MMR genes. Here we hypothesized that oxidative stress may alter MMR function and allow mutations to accumulate in microsatellite sequences.
| MATERIALS AND METHODS |
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Transfection.
HCT116 colorectal cancer cells (ATCC CCL-247) are MMR deficient by homozygous mutation of the hMLH1 gene. HCT116+chr3 are MMR-proficient through stable transfer of chromosome 3 (15)
. The MMR-deficient HCT116+chr3-M2 clone was derived from HCT116+chr3 after exposure to N-methyl-N'-nitro-N-nitrosoguanidine (16
, 17)
. All these cells were grown in Iscoves modified Dulbeccos medium (Life Technologies, Inc., Rockville, MD) containing 2 nM glutamine and 10% fetal bovine serum (Life Technologies, Inc.) at 5% CO2 and 37°. The medium for HCT116+chr3 and HCT116+chr3-M2 also contained 400 µg/ml G418 (Life Technologies, Inc.). Cells were plated at 4 x 105 cells/well in 6-well plates. The next day, cells were transiently transfected with pCMV-(CA)13-EGFP, pCMV-(N)26-EGFP, or pCMV-(CA/T)12-EGFP construct using Effectene (Qiagen, Hilden, Germany).
H2O2 Treatment.
H2O2 (30.9%; Sigma Chemical Co., St. Louis, MO) was diluted in PBS, and the concentration was determined by absorbance at 240 nm as described previously (18)
. Forty-eight h after transfection, triplicate cultures were washed with warm PBS and subsequently treated with various concentrations of H2O2 (0.001, 0.01, 0.1, 1, and 10 mM) in PBS for 60 min. Control cultures were mock-treated with PBS alone. At the end of treatment, cells were placed in the growth medium and allowed to recover from the oxidative stress.
Flow Cytometry.
Twenty-four h after H2O2 treatment, cells were trypsinized, washed in PBS, and resuspended in PBS containing 2% fetal bovine serum and propidium iodide (0.5 µg/ml). Cells were analyzed on a FACSCalibur (Becton Dickinson, Franklin Lakes, NJ). The propidium iodide-negative, EGFP-positive cell population (i.e., the mutant fraction) was quantitated. The corresponding transfection efficiency was measured in parallel experiments with pCMV-(CA/T)12-EGFP transfected cells. Data are shown as mean ± SD of the mutant fraction after normalization for corresponding transfection efficiency (e.g., positive pCMV-(CA)13-EGFP transfected cells x 100/mean of positive pCMV-(CA/T)12-EGFP-transfected cells).
Southern Blot Analysis.
Total cellular DNA was isolated from the transfectants using phenol and chloroform (19)
, 10 µg of total DNA were digested with HindIII or with HindIII and BsgI (New England Biolabs, Beverly, MA), resolved on a 1.2% agarose gel, and transferred onto a charged nylon membrane (Hybond-N+; Amersham Pharmacia Biotech, Piscataway, NJ). pCMV-(CA)13-EGFP was digested with HindIII and EcoRI (New England Biolabs), and a 787-bp fragment containing the EGFP gene was gel-purified, labeled with [
-32P]dCTP using random primer DNA labeling (Life Technologies, Inc.), and further purified using a G-50 microcolumn (ProbeQuant; Amersham Pharmacia Biotech). After prehybridization with aqueous prehybridization-hybridization solution (20)
, the probe was added and hybridized overnight at 68°C. Subsequently, the blot was washed twice with 2x SSC/0.1% SDS at room temperature, washed twice with 0.2x SSC/0.1% SDS at 45°C, washed once for 30 min with 0.2x SSC/0.1% SDS at 68°C, and subjected to autoradiography.
Western Blot Analysis.
Of total proteins extracted from each cell sample after H2O2 treatment, 50 µg were resolved by 10% SDS-PAGE before being transferred onto a polyvinylidene difluoride membrane, as detailed previously (21)
. Aequorea victoria monoclonal antibody (clone JL-8; Clontech) was used for immunodetection of the EGFP protein using a chemiluminescent detection method (ECL-plus; Amersham Pharmacia Biotech).
Statistics.
Paired and unpaired Students t tests were used for comparison within and between groups. Ps
0.05 were regarded as significant.
| RESULTS |
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Spontaneous Frameshift Mutations in HCT116 and HCT116+chr3.
Because MMR is inactive in HCT116 cells, these cells were considered to reflect the capacity of oxidative stress to induce frameshift mutations in colonic cells. By comparing data from HCT116 and from HCT116+chr3, the ability and limits of the MMR system to repair frameshift mutations were estimated. We used the EGFP as a reporter by transfecting cells with pCMV-(CA)13-EGFP and pCMV-(CA/T)12-EGFP. The pCMV-(CA)13-EGFP plasmid contains 13 CA dinucleotide repeats inserted immediately after the start codon of the EGFP gene, which shifts the reading frame to a +2 position, resulting in a nonfluorescent truncated polypeptide. The pCMV-(CA/T)12-EGFP plasmid was used to quantitate transfection efficiency, and it contains a nonperfect run of CA repeats (CA/T)12 (5'-CACACTCACACACACACACACACA) inserted in the same reading frame with EGFP.
Three days after transfection of HCT116 with the pCMV-(CA)13-EGFP plasmid, 1.9 ± 0.1% of cells were positive for fluorescence compared with 26.3 ± 0.7% of cells transfected with the pCMV-(CA/T)12-EGFP plasmid. After normalization for parallel transfection efficiency, the fraction of mutant cells was 7.2 ± 0.3%. Six days after transfection, the mutant fraction decreased to 1.0 ± 0.2%. This was most likely due to loss of plasmid DNA because the number of controls expressing EGFP had also decreased to 10.1 ± 0.7% at the same time point. Southern blot analysis confirmed that this reduction in spontaneous reversion rate was accompanied by a significant loss of transiently integrated and nonintegrated plasmid DNA (Fig. 1)
. When HCT116+chr3 cells were transfected, the same pattern of spontaneous mutations was observed. At day 3 and day 6, 4.6 ± 0.2% and 1.2 ± 0.1% of cells showed restoration of the correct reading frame of EGFP, respectively. At day 3, the spontaneous mutant fraction in HCT116+chr3 was significantly lower than that in HCT116 (P = 0.004), indicating the contribution of the MMR system in repair of such mutations.
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Repeated Oxidative Stress and MSI.
We further intended to simulate chronic inflammation by repeated H2O2 treatment. The limiting factor of such an experiment, however, was that plasmid DNA in the transfectants was lost a few days after transient transfection. The MMR-deficient HCT116+chr3-M2 clone (16)
was included in this experiment to rule out the possibility that the observed difference between HCT116 and HCT116+chr3 was due to other genes besides hMLH1 that had been transferred on chromosome 3. HCT116+chr3-M2, a subclone of MMR-proficient HCT116+chr3 cells, has lost hMLH-1 expression by mutational inactivation after two successive treatments with 5 µM N-methyl-N'-nitro-N-nitrosoguanidine (16
, 17)
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We kept the experimental conditions unchanged and added a second 60-min course of H2O2 two days after the primary treatment, followed by analysis of the cells 3 days later. Based on flow cytometry analysis, mock-treated cells displayed a small mutant fraction (i.e., 0.4 ± 0.2%, 0.3 ± 0.06%, and 0.7 ± 0.03% for HCT116, HCT116+chr3, and HCT116+chr3-M2, respectively). After exposure to 0.001 and 0.01 mM H2O2, no increase in the mutant fraction was detected (Fig. 3)
. At 0.1 mM H2O2, only HCT116 showed an increase in the mutant fraction, whereas HCT116+chr3 and HCT116+chr3-M2 did not show an increase in the mutant fraction. At the 1 mM level, however, all cell lines accumulated mutations. HCT116+chr3-M2 cells were the most susceptible to frameshift mutations (16.4-fold above mock-treated control; P = 0.005), ruling out the possibility that other genes besides hMLH1 that had been transferred on chromosome 3 are responsible for the observed difference between HCT116 (9-fold above control; P = 0.013) and HCT116+chr3 (4.1-fold above control; P = 0.029). These data indicated that repeated oxidative stress might produce frameshift mutations in microsatellites, which escape MMR and may accumulate over time.
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| DISCUSSION |
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Frameshift mutations in HCT116 and HCT116+chr3 involve two important steps: (a) first, H2O2 induces the mutations (as shown from our results in MMR-deficient HCT116 and HCT116+chr3-M2 cells); and (b) second, the mutation must escape the repair mechanisms of the MMR system (as shown in MMR-proficient HCT116+chr3 cells). Exposure of plasmid DNA to H2O2 in vitro is effective in producing frameshift mutations on replication of the damaged DNA in Escherichia coli (22) . Interestingly, such mutations occur preferentially in microsatellites. Exposure of E. coli to low levels of H2O2 also increased the frequency of expansions and deletions within dinucleotide repetitive sequences (23) . ROS are capable of generating and modifying DNA structures that may give rise to slip intermediates during either DNA replication or repair processing of the altered structure. Outside of microsatellites, H2O2-induced frameshift mutations have been found to be uncommon in mammalian cells (24) . We assume that the frameshift mutations in our experiments also occurred within the dinucleotide repeat that had been cloned into the EGFP cDNA immediately after the start codon. Due to the nature of our experiments, however, we were unable to identify the position and nucleotide sequence of the frameshift mutation in the individual fluorescent cells. It was also not possible to calculate the exact mutation rate. These questions might have been addressed by working with stably transfected cell lines, which would enable us to further study repetitive exposure to H2O2. Unfortunately, we were unable to select HCT116 or HCT116+chr3 cells that are stably transfected with pCMV-(CA)13-EGFP.
As shown in the Southern blot experiments, a high copy number of plasmid DNA was present in the cells in both its episomal and transiently integrated forms. We do not know from our experiments whether the frameshift mutations occurred in an episomal or an integrated form. However, the pCMV-(CA)13-EGFP construct does not replicate episomally in HCT116 or HCT116+chr3. H2O2 may have caused modifications of DNA structure before integration, which could have given rise to frame slippage after integration during replication. It is also possible that H2O2 altered plasmid DNA after integration into the host genome. Because histones tend to protect the genomic DNA from oxidative damage, it seems more likely that mutations may have occurred during the nonintegrated condition (25) . In any scenario, the high intracellular copy number found shortly after transfection provides a better target for mutation to occur and increases the likelihood of detecting such mutations with our assay. Theoretically, restoration of the EGFP reading frame in a single copy of plasmid could be sufficient for EGFP expression and detection of the cell by flow cytometry.
Here we report that oxidative stress can induce frameshift mutations in near-isogenic human colon cancer cell lines, HCT116, HCT116+chr3, and HCT116-chr3-M2. It is likely that these mutations occur within the dinucleotide repeat. The induction of frameshift mutations in HCT116+chr3 is notable because this cell line is MMR proficient. It might be asked how frameshift mutations escape recognition by the MMR system in HCT116+chr3. Our group has reported previously that oxidative stress can inactivate MMR function, which can be restored by adding recombinant MMR complexes.6 An alternative explanation would be that the higher mutation rate during oxidative stress may alter the MMR capacity and may allow replication errors to pass the G2 cell cycle checkpoint (16) . No matter what the exact pathway might be, our data demonstrate that oxidative stress can produce frameshift mutations in a MMR-proficient colonic epithelial cell line, which raises a possible mechanism for MSI-L in the setting of chronic inflammation.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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1 Supported by NIH Grant ROI-CA72851 (to C. R. B.), a grant from the Research Service of the Department of Veterans Affairs (to C.R.B.), and the Austrian Scientific Funds Grant J1702-MED (to C. G.). ![]()
2 Both authors contributed equally to this work. ![]()
3 Present address: General Hospital Vienna, Department of Gastroenterology & Hepatology, Wahringer Gurtel 18, A-1090 Vienna, Austria. ![]()
4 To whom requests for reprints should be addressed, at 4028 Basic Science Building, 9500 Gilman Drive, La Jolla, CA 92093-0688. Fax: (858) 822-0301; E-mail: crboland{at}ucsd.edu ![]()
5 The abbreviations used are: ROS, reactive oxygen species; MMR, mismatch repair; MSI, microsatellite instability; EGFP, enhanced green fluorescence protein; MSI-H, MSI-high (
40% of microsatellites are unstable); MSI-L, MSI-low (<40% of investigated microsatellite markers show instability). ![]()
6 C. L. Chang, G. Marra, D. P. Chauhan, H. T. Ha, D. K. Chang, L. Ricciardiello, A. E. Randolph, A. Goel, J. M. Carethers, and C. R. Boland. Oxidative stress inactivates the DNA mismatch repair system, submitted for publication. ![]()
Received 2/13/01. Accepted 8/ 8/01.
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