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Advances in Brief |
The Departments of Surgery, Section of Urology [H. C., M. A. R., M. L. D., J. A. M.], Pathology [M. A. R., N. R. M.], and Biostatistics [L. L., J. M. G. T.], and the Comprehensive Cancer Center [M. A. R., J. M. G. T., M. L. D., J. A. M.], The University of Michigan, Ann Arbor, Michigan 48109-0946, and The Center for Prostate Disease Research, The Uniformed Services University of the Health Sciences, Rockville, Maryland 20852 [J. S. R.]
| ABSTRACT |
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| Introduction |
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| Materials and Methods |
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RNA Profiling and Transcript Characterization
RNA was prepared from cell lines using TRIzol reagent (Life Technologies, Inc., Rockville, MD) according to the manufacturers directions. Differential display reactions were modified from the original description of this technique to allow for visualization by agarose gel electrophoresis (2)
. A total of 14 oligonucleotide primer sets (A-H, M-P, R, and S), each comprising 20 10-mer oligonucleotide primers, were used in the RT-PCR reaction assays (Operon Technologies, Inc., Alameda, CA). All reactions were performed in 96-well microtiter plates, which facilitated the ability to perform a large number of reactions at one time. Transcripts were categorized as overexpressed if they appeared in reactions using RNA from tumor but not normal cells and as underexpressed if they appeared in reactions using RNA from normal but not tumor cells. Differentially expressed transcripts were subcloned into pGEM-T Easy vectors (Promega Corp., Madison, WI) and sequenced. Database searches using the BLAST algorithm were then conducted to identify sequence homologies at the RNA and protein levels (7
, 8)
. Transcript expression patterns detected through differential display were verified by Northern blot analysis with poly(A)+ RNA purified using the PolyATract mRNA magnetic bead-based isolation system (Promega) from the same cell lines used in the differential display experiments. Conventional autoradiography or phosphorimaging was used to visualize homologous sequences in cell line RNA. 5' RACE was performed using sequence-specific oligonucleotide primers, RNA from the 1542T cell line, and the FirstChoice RLM-RACE kit according to the manufacturers recommendations (Ambion, Austin, TX). Clone sequences were compared with cDNA and genomic DNA sequences using Sequencher Software (Gene Codes Corp., Ann Arbor, MI) to define the ATG start site and the entire AIPC open reading frame. The entire AIPC coding sequence, 7926 bp in length, is available through GenBank (accession no. AF338650).
Protein Profiling
Determination of Protein Structure.
The predicted 2642-residue AIPC protein sequence was examined for the presence of functional motifs through a ProfileScan search of the protein profile entries in PROSITE, Pfam, and MultAlin accessed through the ExPASy (Expert Protein Analysis System) proteomics server of the Swiss Institute of Bioinformatics (9
, 10)
.4
Antibody Production.
A peptide comprising amino acid residues 17421752 of AIPC was synthesized on a branching lysine core through a single solid-phase synthesis to construct a MAP, which was then used to immunize two rabbits (11)
. The anti-AIPC antibody was subsequently affinity purified from immunized rabbit serum (Bethyl Laboratories, Inc.).
Western Blot Analysis.
To verify that the AIPC antibody specifically recognized the AIPC protein, oligonucleotide primers P1 (5'-ACGTACGTGGATCCCCTCCTCAGCCGAAAACAAACCT-3')containing a BamHI restriction site and P2 (5'-ACGTACGTGAATTCGCGCCCTGCCCTCTGCTCTACA-3') containing an EcoRI site were used in a PCR reaction to amplify a portion of the AIPC sequence spanning nucleotides 49595490 (amino acid residues 16531830) inclusive of the antigenic site. The resulting PCR product was subcloned into a pGEX-2T plasmid, sequence verified, and expressed in Escherichia coli DH5
cells as a GST fusion protein. Cell lysates were incubated with glutathionine-Sepharose 4B beads, and the AIPC-GST fusion protein was eluted with glutathionine elution buffer according to the manufacturers protocols (Amersham Pharmacia Biotech, Piscataway, NJ). Twenty-five mg of protein were separated by electrophoresis through a 10% Tris-Glycine Laemmli gel (Novex, San Diego, CA). The AIPC-GST fusion protein was detected using the anti-AIPC primary antibody at 1:1000 dilution and a donkey-antirabbit secondary antibody (Amersham Pharmacia Biotech) and detected with the anti-GST primary antibody at 1:1000 dilution (Amersham Pharmacia Biotech) and a rabbit-antigoat secondary antibody (Sigma-Aldrich, St. Louis, MO) using an ECL detection system (Amersham Pharmacia Biotech).
To quantitate AIPC protein in mammalian cells, cells were lysed for 50 min on ice in lysis buffer [50 µM Tris-HCl (pH 8), 120 µM NaCl, 0.5% NP40, 40 µM phenylmethylsulfonyl fluoride, 5 µg/ml leupeptin, 5 µg/ml aprotinin, and 200 µM sodium orthovanadate]. Lysates were centrifuged, the supernatants were collected, and protein was quantitated using a Bradford assay. Forty mg of protein/cell line were separated by electrophoresis through a 6% Tris-Glycine Laemmli gel (Novex, San Diego, CA) and electroblotted. AIPC protein was detected using the anti-AIPC primary antibody at 1:1000 dilution with a donkey-antirabbit secondary antibody and visualized using an ECL detection system.
Tissue Microarray Construction and Immunohistochemical Analysis.
A high-density tissue microarray was constructed using fixed archival prostate tissue samples collected retrospectively from patients who had undergone radical retropubic prostatectomy at the University of Michigan Medical Center (Ann Arbor, MI). The array was assembled using the manual tissue puncher/array (Beecher Instruments, Silver Spring, MD) to produce 432 tissue cores
0.6 mm in diameter, which were inserted into a 45 x 20 x 12-mm recipient block and spaced at a distance of 0.7 mm apart, as described previously (12)
. Sections taken from the donor block were stained with H&E for pathological evaluation or subjected to standard indirect immunoperoxidase procedures for protein detection. Slides were pretreated by microwaving at 100°C in Tris-EDTA buffer for antigen retrieval, and incubation in primary AIPC antibody was carried out for 1 h at 1:800 dilution. Digital images of tissue microarray elements were captured for telepathological review using the x20 objective of an Olympus BX50 microscope, Sony Digital camera, and IP-Lab Imaging Software. Images were archived on a JAZ disc and presented for evaluation of immunohistochemical staining in I-View Multimedia on an Apple G3 workstation. H&E-stained images were paired with matching AIPC-stained array elements. Immunohistochemical staining of epithelial cytoplasm was graded into four groups: absent (0), weak (1), moderate (2), or strong (3) staining. All data were compiled in a customized relational database (Microsoft Access) that maintained patient/tissue diagnosis, array location, and histology results.
Statistical Analysis
A cumulative logistic regression mixed model for ordinal responses with repeated measures was used to describe the relationship between the immunohistochemical staining results and tissue type or clinical variables (predictors) using MIXOR (version 2; Ref. 13
). Univariate analysis was used to determine significance levels.
| Results and Discussion |
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9% (25 of 280) of all transcripts examined by these methods were differentially expressed. One of the differentially expressed transcripts comprised a 1.4-kb PCR product that was substantially up-regulated in RNA purified from the 1532T and 1542T prostate primary tumor-derived cell lines compared with the normal tissue-derived 1535N cell line (Fig. 1A)
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AIPC Protein Expression Is Up-Regulated in Human Prostate Tumor Cell Lines and Tissues.
We next produced an antibody to the AIPC protein to examine its expression in human prostate cell lines and tissues. A hydrophilicity and antigenicity profile revealed a potentially antigenic site at amino acid residues 17421753, and a MAP peptide of these residues proved immunogenic in rabbits. To test the specificity of this antibody, a portion of the AIPC sequence between nucleotides 4959 and 5490 and inclusive of the antigenic site was subcloned as part of a GST fusion protein construct. Immunoblots against E. coli protein lysates using antibodies against either AIPC or GST identified the same Mr 58,000 fusion protein, demonstrating that the anti-AIPC antibody was specific for the antigenic sequence (Fig. 2B)
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AIPC Protein Expression Is Up-Regulated in Cultured Human Prostate Tumor Cells.
Western blot analysis using affinity-purified AIPC-specific antibody demonstrated a single predominant band in cultured prostate cells of high molecular weight (Mr >220,000), consistent with a theoretical protein weight of Mr 280,000. Moreover, this protein was abundantly expressed in 1532T, 1535T, and 1542T human prostate tumor-derived cultured cells and was more variable in normal human prostate cultured cells, with a low level of expression evident in 1535N cells and virtually no expression in 267B1 cells (Fig. 2C)
. These results were consistent with those observed by RT-PCR and Northern blot analysis and suggested that AIPC was abundantly expressed at both the RNA and protein levels in prostate tumor cells.
AIPC Protein Expression Is Up-Regulated in Human Prostate Tumors.
Expression of the AIPC protein was next evaluated in normal and neoplastic human prostate tissues by immunohistochemical analysis of a tissue microarray. The tissue microarray comprised 313 tissue elements from 42 separate prostate glands representing 158 primary tumor, 18 high-grade PIN, 46 normal atrophic, and 91 normal benign prostate specimens. Staining intensity was evaluated for each tissue element on a scale of 03, corresponding to absent (0), weak (1), moderate (2), or strong (3) staining. A portion of the array is shown in Fig. 3
. This analysis demonstrated that the AIPC protein was highly expressed (at a staining intensity of 2 or 3) in 75% of tumors, 83% of PIN lesions, 18% of atrophic, and 3% of normal benign tissues (P < 0.0001; Fig. 4
). These results showed that the AIPC protein is abundantly expressed in high-grade PIN and human prostate tumors. The observation of abundant AIPC protein expression in high-grade PIN, a putative premalignant lesion of the prostate, and tumor glands suggests that the activation of AIPC expression is an early event in human prostate tumorigenesis.
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The AIPC protein was highly expressed in the majority of prostate tumors and did not associate with the specific diagnostic and prognostic variables of tumor pathological stage or grade and patient preoperative prostate-specific antigen level (Fig. 4A)
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Possible Role(s) for the AIPC Protein in Prostate Tumorigenesis.
The six PDZ domains within the AIPC protein sequence may mediate binding interactions between AIPC and other cellular proteins. PDZ domains may occur in multiple copies/protein, with each PDZ domain having similar or different binding specificities. PDZ domain-mediated protein-protein interactions have been implicated in the organization of protein complexes in signal transduction cascades, in coupling channels and transmembrane receptors to downstream signaling elements, in clustering transmembrane receptors and channels, in recruiting cytosolic proteins to membrane complexes, in organizing large two-dimensional complexes like cell junctions and plasma membrane domains, and in interactions with the cortical cytoskeleton (16
, 17)
. Some of these PDZ-associated functions, particularly those involving signal transduction, clustering, and scaffolding, may have important functions in tumorigenesis. One recent study reported up-regulation of a PDZ domain-containing protein, PCD1, in several human tumor types, including malignant prostate tissues (18)
. Another study demonstrated that the APC protein binds to the second of five PDZ domains of the protein tyrosine phosphatase protein PTP-BL and suggested that this binding interaction might modulate the phosphorylation of associated proteins and thereby play a role in several cellular activities that are dysfunctional in cancer cells, including cell division, migration, and adhesion (19)
. Although the binding specificities of the six PDZ domains within the AIPC protein are unknown, future studies will identify which cellular proteins bind the AIPC PDZ domains and how these interactions may contribute to tumorigenesis in the prostate.
Another intriguing feature of AIPC protein expression is its localization to the basal cell layer in normal prostatic glands and its ubiquitous expression in PIN and malignant glands. A current hypothesis is that prostatic stem cells reside in the basal cell compartment of prostatic epithelium and may actually comprise the majority of basal cells (20) . AIPC staining was absent from secretory cells but was observed in the basal cell layer in normal prostatic glands and was both uniform and intense in neoplastic (PIN and tumor) glands. If stem cells actually give rise to differentiated secretory cells and undifferentiated neoplastic cells in the prostate, it is possible that AIPC protein expression is down-regulated in differentiated secretory cells but is up-regulated in proliferative stem cells and neoplastic cells. Moreover, the observed abundant expression of AIPC protein in both high-grade PIN and tumor cells is consistent with a role for the AIPC protein in the initiation or early promotion of malignant transformation in the prostate. Future studies will test this hypothesis and will focus on the possible contribution of the AIPC protein and its protein binding partners to prostate tumorigenesis.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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1 Supported by NIH/National Cancer Institute Grant 1P50 CA69568 Specialized Program of Research Excellence in Prostate Cancer (to J. A. M., M. A. R., and J. M. G. T.). ![]()
2 To whom requests for reprints should be addressed, at Department of Surgery, Section of Urology, The University of Michigan, 7306 CCGC, 1500 East Medical Center Drive, Ann Arbor, MI 48109-0946. Phone: (734) 647-8121; Fax: (734) 647-9480; E-mail: jcoska{at}umich.edu ![]()
3 The abbreviations used are: AIPC, activated in prostate cancer; RT-PCR, reverse transcription-PCR; RACE, rapid amplification of cDNA ends; MAP, multiple antigenic peptide; GST, glutathione S-transferase; PIN, prostatic intraepithelial neoplasia. ![]()
4 Internet address: http://www.expasy.ch. ![]()
Received 5/23/00. Accepted 1/31/01.
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