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Molecular Biology and Genetics |
CNRS UPR2169 Instabilité Génétique et Cancer, Institut Gustave Roussy, 94805 Villejuif, France [A. F., P. P.], and Department of Pathology, University of Washington School of Medicine, Seattle, Washington 98195-7470 [J. O.]
| ABSTRACT |
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| INTRODUCTION |
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The checkpoint sensitive to the catenation status of the chromosomes is called decatenation checkpoint and can be activated during the G2 phase of the cell cycle by inhibition of TopoII4 activity. Because this checkpoint seems to be absent in yeast, its existence was first described in mammals by demonstrating checkpoint bypass induced by caffeine or phosphatase inhibitors after treatment with TopoII catalytic inhibitors (5) . Catalytic inhibitors, such as ICRF154, ICRF187, and ICRF193, inhibit ATPase activity of TopoII and stabilize the enzyme in the form of a closed clamp instead of stabilizing the TopoII/DNA-cleavable complex so that no DNA strand breaks are induced (6 , 7) . The decatenation checkpoint is distinct from the G2 DNA damage checkpoint because it appears to be ATM independent and is not sustained by down-regulation of cyclin-dependent kinase 1/cyclin B1 activity (5 , 8) . Instead, it was demonstrated that decatenation checkpoint activation relies on ATR activity and nuclear exclusion of cyclin B1 (8) . Because the decatenation checkpoint is not properly activated in BRCA1-mutant cells (8) , it seems that a functional BRCA1 protein is also required in this checkpoint response. However, it is still unknown whether physical structures within chromosomes, such as chromosome tangles, are monitored by the TopoII-dependent decatenation checkpoint and whether other proteins help TopoII in this function. The precise target(s) of the ATR kinase is also unknown. Override of the decatenation checkpoint and progression into mitosis in the absence of TopoII activity could result in catenated chromatids before prophase, failed segregation of sister chromatids in metaphase-anaphase transition, and, finally, a high degree of genomic instability (9, 10, 11) .
DNA Topos and helicases work together in many aspects of DNA metabolism where the individual strands of double-stranded DNA must be separated (12) .
The Sgs1 protein, a yeast RecQ helicase, physically interacts with both TopoII and TopoIII (13, 14, 15)
, and their association would be important for facilitating decatenation of late-stage replicons (13
, 16)
. Also, two of the human RecQ helicases, the Bloom syndrome protein (BLM) and RECQ5, physically interact with TopoIII
, contributing to maintenance of genomic stability (17
, 18)
. Mutations in some of the genes encoding RecQ helicases are implicated in human disorders such as WS and Bloom syndrome, caused by mutations in WRN and BLM, respectively (19)
, which are both characterized by genomic instability and cancer predisposition. Biological and biochemical evidence suggests that WRN helicase functions in multiple DNA metabolisms, including replication and recombination (19)
.
In this study, we analyzed the activation of the decatenation checkpoint and its contribution to the maintenance of genomic stability in WS cells.
| MATERIALS AND METHODS |
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Immunoblotting and Immunoprecipitation.
Cells (1 x 107) were lysed as described previously (23)
, and 40 µg of total proteins were subjected to SDS-PAGE. Immunoblots were performed with rabbit polyclonal antibodies against WRN (Novus Biochemicals; 1:4000), BRCA1 (Santa Cruz Biotechnology), or TopoII (Oncogene Research) followed by chemiluminescence detection by enhanced chemiluminescence plus (Amersham). The anti-TopoII antibody used in this study allows detection of both
and ß forms. Equal loading and transfer were monitored by Ponceau red staining of the membrane or by reprobing the blots with anti-actin antibody.
In immunoprecipitation experiments, cells were lysed in a mild lysis buffer as described previously (23)
, and 0.52 mg of total proteins were immunoprecipitated using anti-BRCA1 (Oncogene Research) or anti-WRN (BD PharMingen) monoclonal antibodies. For
-phosphatase treatment, BRCA1 immunoprecipitates were resuspended in a phosphatase buffer and incubated for 30 min with 300 units of
-phosphatase (New England BioLabs) at 30°C and then boiled in 2x electrophoresis sample buffer before Western blotting analysis.
Evaluation of the Decatenation Checkpoint Activity.
In all cases, MI was determined by counting 1000 cells/culture, as described previously (24)
. Localization of cyclin B1 by immunofluorescence was carried out as described previously (8)
on mock-treated cells or cells exposed to 150 µM ICRF187 for 3 h.
Analysis of Chromosomal Damage.
Subpopulations of cells in S phase were labeled with 30 µg/ml BrdUrd (Sigma-Aldrich) for 2 h, and then 150 µM ICRF187 (Cardioxane; Chiron) was added for 4 h to induce the checkpoint response in labeled cells. Duplicate cultures from wt lymphoblasts were treated with 2 mM caffeine (Sigma-Aldrich) together with ICRF187 to induce a checkpoint override. The chromosomal instability derived from the decatenation checkpoint override was analyzed in BrdUrd-labeled cells harvested at their second mitosis after 21 and 25 h of recovery.
Evaluation of the Apoptotic Cells.
For the determination of the effects of a continuous inhibition of TopoII, normal and WS cells were exposed to 150 µM ICRF187 for 12, 18, and 24 h. For the evaluation of checkpoint override in wt cells, cultures were exposed for 8 h to 150 µM ICRF187 plus 2 mM caffeine and then washed and placed into ICRF187-containing medium. Cells were then harvested, fixed, and stained with bis-benzimide H33342 (Sigma) as described previously (20)
. A minimum of 1000 cells were scored for each experimental point, and statistical analysis of a minimum of three independent experiments was done by
2 test.
Analysis of DNA Damage by Comet Assay.
DNA damage was evaluated by comet assay (single cell gel electrophoresis) under denaturing conditions as described by Olive et al. (25)
. The analysis of induced damage was performed at 0, 6, 8, and 12 h; the addition of 30 µg/ml BrdUrd during the last 2 h before harvesting allowed us to determine whether cells with comets belong to the S phase. Immunodetection of BrdUrd incorporation was made according to our previously described procedure (24)
. A minimum of 200 cells were analyzed for each experimental point.
Immunofluorescent Analysis of RAD51 Focal Relocalization.
Cells treated with or without ICRF187 were harvested after 0, 6, 10, or 14 h; spread onto poly-L-lysine-coated slides; and fixed and immunostained with rabbit polyclonal anti-RAD51 (Oncogene Research) as described previously (20)
. For each time point, at least 200 nuclei were examined, and RAD51 foci were scored at x100 magnification. Only nuclei showing >10 foci were considered positive.
| RESULTS |
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Decatenation checkpoint activation has been shown to rely on nuclear exclusion of cyclin B1 (8)
. We therefore examined localization of cyclin B1 in wt and WS cells after triggering the decatenation checkpoint by ICRF187 treatment. We found that cyclin B1 was excluded from the nucleus in wt and complemented WS cells, but not in WS cells (Fig. 1E)
. Also inhibition of Polo-like kinase (PLK) activity, a phenomenon recently associated with activation of the decatenation checkpoint (26)
, was defective in WS cells (data not shown).
The defect in the decatenation checkpoint activation observed in WS cells was not attributable to differences in TopoIl levels or activity as assessed by Western immunoblot analysis (Fig. 1F)
or TopoII assay (data not shown) and was consistent with our previously reported data (27)
.
These results provide direct evidence that the decatenation checkpoint was not properly activated in WS cells and that a functional WRN is required for the checkpoint activity.
ICRF187-induced BRCA1 Phosphorylation Is Abolished in WS Cells.
ATR kinase and the BRCA1 protein have been shown to be essential for correctly establishing the decatenation checkpoint (8)
. It has been reported that ATR is able to phosphorylate BRCA1 after several genotoxic stresses (28
, 29)
, but it is not known whether BRCA1 is also phosphorylated in response to decatenation checkpoint activation. Thus, we investigated the ability of ICRF187 to induce the phosphorylation of BRCA1 in wt, WS, and ATRkd cells.
Treatment with ICRF187 induced a bandshift in BRCA1 in wt cells (Fig. 2A)
. This shift was absent in WS cells and in cells overexpressing ATRkd but was present in WS-complemented cells (Fig. 2A)
. As expected, treatment with 30 J/m2 UVC caused a BRCA1 bandshift in wt and WS cells, but not in ATRkd cells (Fig. 2A)
. Moreover, phosphatase treatment of BRCA1 immunoprecipitates from mock-treated or ICRF187-exposed cells reversed the bandshift in wt cells, but not in WS or ATRkd cells, indicating that the observed mobility shift was attributable to phosphorylation (Fig. 2B)
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Because WRN seems to be involved in decatenation checkpoint activation, and given that Topos may interact with RecQ helicases (12)
, we sought to determine whether WRN and TopoII coimmunoprecipitate in wt cells after decatenation checkpoint activation. As shown in Fig. 3D
, TopoII was detected in WRN immunoprecipitates after ICRF187 treatment. Because the available TopoII antibody does not work well in either immunoprecipitation or immunofluorescence, we could not test the presence of WRN in TopoII immunoprecipitates or a possible WRN/TopoII colocalization after decatenation checkpoint induction.
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Override of the Decatenation Checkpoint Does Not Result in a Large Induction of Chromosomal Breakage and Rearrangements.
We then investigated whether failure of the decatenation checkpoint could correlate with enhanced chromosomal instability in WS cells. To test this hypothesis, metaphase preparations from ICRF187-treated wt and WS cells, as well as ICRF187-treated wt cells in which the checkpoint was reversed by caffeine, were analyzed for chromosomal aberrations. Examination of the chromosomal damage caused by an override of the decatenation checkpoint in first mitosis cells (i.e., cells harvested immediately after treatment) is made difficult due to improper chromatid condensation and decatenation. To overcome this problem, we analyzed chromosomal aberrations in cells in second mitosis. A subpopulation of S-phase cells was pulse-labeled with BrdUrd and ICRF187, and chromosomal damage was scored only in the labeled population. In WS cells, checkpoint override did cause chromosomal instability, but the number of chromosomal aberrations was only about 2-fold the control levels (Table 1)
. Interestingly, caffeine-mediated checkpoint override in wt cells resulted in less chromosomal damage with respect to that observed in WS cells. Because increased chromosomal damage after checkpoint override could be masked by apoptotic cell death, we analyzed apoptosis from parallel cultures. Apoptotic cell death was not triggered by pulse exposure to ICRF187 in either WS cells or wt cultures where checkpoint was inactivated by caffeine treatment (Table 1)
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4-fold increment of the chromosomal damage over the control and also resulted in a higher rate of apoptotic cell death (Supplementary Table 1).2 These results suggest that the mere deficiency of the decatenation checkpoint function does not result in a significant induction of chromosomal instability unless other surveillance systems (i.e., WRN or ATR) are leaky or absent.
Continuous TopoII Inhibition Induces Apoptotic Cell Death in WS Cells.
Override from the decatenation checkpoint did not result, per se, in large chromosomal instability unless other major surveillance systems are defective (i.e., ATR) Thus, we wondered whether sustained TopoII inhibition could result in enhanced apoptotic cell death in cells that escaped the decatenation checkpoint. Because catalytic inhibition of TopoII has been reported not to affect the M-G1 or the G1-S transition (10)
, we focused our analysis on the effect of the progression through S phase. We treated cultures with 50 or 150 µM ICRF187 and examined them 12, 18, or 24 h later (Fig. 3, A and B
, respectively). We found that continuous TopoII inhibition induced apoptotic cell death in WS cells (Fig. 3, A and B)
. This effect was time dependent; in fact, apoptosis appeared starting at 18 h and reached maximum value at 24 h. The level of apoptotic cells was at about 15% when we treated cells with 50 µM ICRF187 but became about 35% at 150 µM ICRF187, showing that this phenomenon was dose dependent. It is also noteworthy that transfection with wt WRN cDNA restored resistance to ICRF187-induced apoptosis. Because wt cells efficiently trigger the checkpoint in response to ICRF187 treatment, we forced override of the decatenation checkpoint by a pulse treatment with caffeine. After 8 h of caffeine treatment, wt cells were placed into a medium containing only ICRF187 to avoid permanent exposure to caffeine, which could result in the inhibition of other surveillance pathways. We found that wt cells that escaped the decatenation checkpoint by caffeine and were treated continuously with ICRF187 underwent apoptotic cell death (
7%, Fig. 3C
), but to a lesser extent than that seen in WS cells, also taking into account that under our experimental conditions, we induced release from the checkpoint only in
50% of the total wt cellular population (Fig. 3D)
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These results suggest that the elevated rate of apoptosis observed in WS cells after TopoII inhibition might correlate with the role that WRN carries out in the cell, possibly in the subsequent S phase.
TopoII Inhibition after Override of the Decatenation Checkpoint Results in DNA Damage in the Subsequent S Phase.
Because we found that sustained inhibition of TopoII activity in the next round of replication after decatenation checkpoint failure triggered apoptotic cell death, we analyzed the degree of DNA damage induced in S phase by ICRF187 treatment in cells that escape from the decatenation checkpoint. To visualize damaged cells belonging to the S phase, we exposed cells to BrdUrd. DNA damage was analyzed at 0, 6, 8, and 12 h after 150 µM ICRF187 treatment by comet assay (Fig. 4A)
. We found that continuous inhibition of TopoII produced DNA damage in a time-dependent manner in WS cells, but not in wt cells. On the other hand, when we analyzed comets induced by continuous ICRF187 exposure followed by an 8-h pulse treatment with caffeine, we detected a time course of induced DNA damage in wt cells that was similar to that observed in WS cells, although at a reduced level. This is consistent with the fact that only a subpopulation of wt cells evaded the decatenation checkpoint because of the pulse exposure to caffeine (Fig. 4A)
. Interestingly, about 80% of cells with comets belonged to the S phase as showed by BrdUrd incorporation in either WS or caffeine-treated wt cells (Fig. 4B)
. Consistent results were obtained analyzing by the subnuclear relocalization of the RAD51 recombinase, which is a marker of an ongoing double-strand break repair in the S phase. RAD51 relocalization was observed only in ICRF187-treated WS cells or in wt cells in which the decatenation checkpoints were overridden by caffeine, but not in wt cells exposed only to ICRF187 or in mock-treated controls (Fig. 4, C and D)
. Interestingly, the percentage of RAD51-positive nuclei roughly matched that of the cells showing BrdUrd-positive comets as shown in Fig. 4A
.
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| DISCUSSION |
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The helicase activity of WRN together with the activity of TopoII could serve as a sensor to monitor catenation status of chromatids, leading to the activation of the checkpoint cascade. Consistent with this hypothesis, we found that WRN and TopoII coimmunoprecipitated after decatenation checkpoint activation and that phosphorylation of BRCA1, one of the elements of decatenation checkpoint function, is absent in WS cells. In yeast, the RecQ helicase Sgs1 has been proposed to collaborate with TopoII in the decatenation of late-stage replicons at sites of converging forks (13) , and bacterial RecQ together with TopoIII may present an active catenase/decatenase activity (13 , 31) . It is possible that WRN and TopoII could represent in human cells a functional analogue of Sgs1 and TopoII in yeast. Accordingly, it might be possible that the decatenation checkpoint function senses decatenation status of very late-stage replicons, arresting the cell cycle if these replicons are still catenated, hence triggering the checkpoint response. From this point of view, it is not surprising that the upstream kinase involved in the decatenation checkpoint activity is ATR and not ATM because ATR is the key kinase in response to stress at the replication fork level (32) .
Despite the risk of cell cycle progression in the presence of tangled and incompletely decatenated chromatids, little is known about the direct contribution of the decatenation checkpoint to genetic stability. We provided evidence that failure of the decatenation checkpoint is not sufficient per se to greatly increase genomic instability, at least at the chromosomal level, because chromosomal damage is not overtly enhanced after ICRF187 treatment in either WS cells or wt cells that artificially escaped the checkpoint. On the contrary, BRCA1 mutations or expression of a dominant-negative form of ATR, two other conditions associated with defects in the decatenation checkpoint, results in a phenotype suggestive of inappropriate mitotic entry, with several chromosomal abnormalities and features of mitotic catastrophe (8) . Our results suggest that this widespread genomic instability probably does not derive directly from entering into mitosis with insufficiently decatenated chromatids, but rather from the combined effects of failure of multiple surveillance pathways because ATR and BRCA1 are both involved in several cell cycle arrest pathways (32 , 33) . On the contrary, WS cells apparently do not have other major checkpoint defects (20 , 34) , thus allowing a more accurate analysis of the contribution of decatenation checkpoint failure to gross chromosomal instability.
Consistently, ICRF187 treatment of ATRkd cells led to a greater enhancement of chromosomal damage over the mock-treated control (Supplementary Table 12 ) than that observed in WS cells.
When sustained TopoII inhibition was combined with the decatenation checkpoint failure, we found that DNA strand breaks were formed in replicating cells, leading to the activation of DNA repair and ultimately to apoptotic cell death, which was markedly elevated in the absence of an active WRN protein. Because such a large apoptotic response was not found after pulse treatment with ICRF1875
(Table 1)
and because of a selective induction of DNA strand breakage in cells undergoing DNA replication with insufficiently decatenated chromatids, it is possible that TopoII and WRN activities are required to deal with structural problems before or during DNA replication. In particular, TopoII could decatenate still-catenated chromatids of cells that have overridden the decatenation checkpoint after or during DNA replication, avoiding DNA breakage. Indeed, a function of the decatenase activity of TopoII throughout the S phase has been described previously (31)
, and a delay of the S phase after catalytic inhibition of TopoII has been also been reported (10)
. On the other hand, DNA breakage resulting from mitotic progression in the presence of tangled chromatids could be handled by the DNA repair systems before S phase. In the absence of an active TopoII, extensive DNA breakage is created in replicating cells, requiring massive replication-associate DNA repair. Such a pathway can be carried out by recombination and could very well rely on the presence of an active WRN protein (20
, 35)
. In the concurrent absence of TopoII and WRN activities, unrepaired or misrepaired DNA breakage could cause apoptotic cell death. Supporting this possibility, WRN deficiency determines a phenotype of enhanced apoptosis as a consequence of the induction of DNA breakage selectively in replicative cells (20)
.
Taken together, our results integrate WRN and TopoII in the process of sensing incomplete catenated chromatids to trigger the checkpoint response and the consequent BRCA1 phosphorylation (Fig. 4E)
and further implicate WRN in the correct handling of DNA strand breakage resulting from replicating incomplete catenated chromatids. Our findings also suggest that failure of the decatenation checkpoint could contribute to genomic instability through association with mutations in other "caretaker" genes, such as ATR, BRCA1 or WRN, rather than by itself.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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1 Supported in part by "Young Investigators" Grant D.R. 1641/01 from Università della Tuscia/Italian Ministry of Research (to P. P.) and by a research grant from Institut Gustave Roussy (to A. F.). ![]()
2 Supplementary data for this article are available at Cancer Research Online (http://cancerres.aacrjournals.org). ![]()
3 To whom requests for reprints should be addressed, at Institut Gustave Roussy, Pavillion de Recherche 2-CNRS UPR2169, 39, Rue Camille Desmoulins, 94805 Villejuif, France. Phone: 33-(0)1-42116337; Fax: 33-(0)1-42115008; E-mail: franchitto{at}igr.fr ![]()
4 The abbreviations used are: Topo, topoisomerase; WS, Werner syndrome; LCL, lymphoblast cell line; ATRkd, kinase dead form of the ATR kinase; MI, mitotic index; BrdUrd, 5-bromo-2'-deoxyuridine; wt, wild-type. ![]()
Received 10/28/02. Accepted 4/11/03.
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