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Molecular Biology and Genetics |
Division of Biochemistry, Chiba Cancer Center Research Institute, Chiba 260-8717, Japan [Y. O., T. O., K. M., M. A., A. N.], and Department of General Surgery, Graduate School of Medicine, Chiba University, Chiba 260-0856, Japan [Y. O., M. M.]
| ABSTRACT |
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| INTRODUCTION |
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, promotes breast tumor growth (7)
. In addition, the APC,3
which acts as an E3 ligase at mitosis, is required for the destruction of mitotic cyclins and thereby allows progression through mitosis and mitotic exit (8, 9, 10, 11)
. These findings strongly suggest that down-regulation of the growth and/or tumor suppressor by ubiquitin-dependent breakdown contributes to cell cycle progression and/or tumor cell proliferation, respectively. All known E2 proteins are structurally related and share a conserved domain of Mr 16,000 that carries the cysteine residue required for the formation of ubiquitin-E2 thiol ester (12) . E2 protein catalyzes the E3-dependent multiple ubiquitination that leads to degradation of substrate proteins, and various E2 and E3 proteins function in cognate pairs and provide specificity in substrate protein ubiquitination (12 , 13) . Recent work provides evidence that various E2 proteins play a cell cycle-regulatory role. It has been shown that UbcH10 or Ubc4 is required for APC-dependent ubiquitination of mitotic cyclins (9 , 14 , 15) , and dominant-negative UbcH10 blocks the ubiquitination as well as the destruction of mitotic cyclins and causes cells to accumulate in mitosis (16) . In addition, Ubc2/Rad6 and Ubc3/CDC34 are specifically involved in the ubiquitination-dependent degradation of the cyclin-dependent kinase inhibitor p27 (17) . Intriguingly, the expression level of UbcH10 is up-regulated in NIH3T3 cells transformed by a EWS-FLI1 fusion gene associated with Ewings sarcoma (18) . Recently, it has been shown that the expression levels of the ubiquitin-conjugating enzyme gene Ubc9 are increased in human lung adenocarcinomas compared with those of their corresponding normal tissues (19) . Thus, certain E2 proteins could be closely linked to the cell cycle progression and/or tumorigenesis. However, little is known about the potential contribution of E2 protein to the tumorigenic response mediated by ubiquitination-dependent proteolysis.
In the present study, we examined by quantitative real-time RT-PCR the expression patterns of 17 E2 genes in 25 different human normal tissues, 24 human cancerous cell lines, and various primary tumors and their corresponding normal tissues. We found that UbcH10 was highly expressed in numerous cancerous cell lines and various primary tumors as compared with matched normal tissues. Additionally, overexpression of UbcH10 in NIH3T3 cells promoted deregulated cell growth and also induced anchorage-independent growth.
| MATERIALS AND METHODS |
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Tumor Samples.
Surgically resected tumor tissues and their corresponding normal tissues used in this study were obtained as frozen specimens from Chiba Cancer Center Hospital between 1995 and 1996 (Chiba, Japan). These tumors included six lung adenocarcinomas, three gastric adenocarcinomas, two uterine carcinomas, and six bladder carcinomas.
Plasmids.
To obtain full-length human UbcH10 cDNA, total RNA prepared from human fetal liver was reverse transcribed using oligo(dT) and Superscript II reverse transcriptase (Invitrogen). The subsequent PCR was performed with the following oligonucleotide primers: UbcH10 sense, 5'-CGCCGAATTCACGGCTTCCCAAAAC-3'; and UbcH10 antisense, 5'-TATAGCGGCCGCACAAAAAGGACAGACCATC-3'. These sense and antisense oligonucleotide primers were synthesized based on the nucleotide sequence databases (GenBank and European Molecular Biology Laboratory) and contained an engineered EcoRI and NotI restriction site (underlined), respectively. The specific amplified fragment was gel purified, digested completely with EcoRI and NotI, and subcloned into the identical restriction sites of the pcDNA3-FLAG expression plasmid to give pcDNA3-FLAG-UbcH10. The resultant expression plasmid was sequenced to confirm in-frame fusion of the UbcH10 and FLAG tag.
Immunofluorescence.
Transfected cells were grown on coverslips. After incubation for 36 h, cells were washed with ice-cold PBS, fixed with 3.7% formaldehyde in PBS for 30 min, permeabilized with 0.2% Triton X-100 for 5 min, and then blocked in PBS supplemented with 3% BSA. The cells were sequentially treated with a monoclonal anti-FLAG antibody (M2; Sigma Chemical Co., St. Louis, MO) and a rhodamine-conjugated goat antimouse IgG antibody (Invitrogen). The stained cells were visualized under a confocal laser scanning microscope (Olympus, Tokyo, Japan).
Western Blot Analysis.
Cells were washed with ice-cold PBS, scraped in SDS sample buffer (20)
, and sonicated briefly. Equal amounts of protein were loaded onto 15% SDS-polyacrylamide gels based on estimations from Coomassie Blue staining for each sample. The proteins were transferred onto nitrocellulose membrane filter (Toyo Roshi, Tokyo, Japan) using a semi-dry transfer apparatus (Bio-Rad). Nonspecific binding sites were blocked with 5% nonfat dry milk powder in TBST [20 mM Tris-Cl (pH 7.6), 150 mM NaCl, and 0.1% (v/v) Tween 20]. The membrane was incubated with the monoclonal anti-FLAG antibody or the polyclonal anti-actin antibody (20-33; Sigma Chemical Co.), followed by incubation with a horseradish peroxidase-conjugated goat antimouse IgG secondary antibody (Cell Signaling Technology, Beverly, MA). Enhanced chemiluminescence (ECL; Amersham Pharmacia Biotech, Piscataway, NJ) was used for detection.
BrdUrd Incorporation during DNA Synthesis.
Cells were seeded at a density of 1 x 105 cells/60-mm dish. After incubation for 36 h, cells were treated with 10 µM BrdUrd (Roche Molecular Biochemicals, Indianapolis, IN) for 10 min. Cells were then washed three times with ice-cold PBS and fixed with 70% ethanol for 20 min at -20°C. After washing with PBS, cells were incubated with a monoclonal anti-BrdUrd antibody diluted 1:10 in incubation buffer [66 mM Tris-Cl (pH 7.5), 0.66 mM MgCl2, and 1 mM ß-mercaptoethanol] for 1 h at 37°C, washed three times with PBS, incubated with a FITC-conjugated goat antimouse IgG secondary antibody diluted 1:20 in PBS for 1 h at 37°C, and again washed three times with PBS. Cell nuclei were stained with propidium iodide. The stained cells were visualized under a confocal laser scanning microscope (Olympus).
Cell Proliferation.
To evaluate cell proliferation, cells were plated onto 24-well cell culture dishes at a density of 5 x 103 cells/well in 1 ml of culture medium containing 10% or 2% CS. Cells were allowed to adhere to the bottom of the cell culture dish for 24 h. At the indicated time periods, cells were trypsinized, and cell counting was carried out in triplicates using a Coulter Counter (Coulter Electronics Ltd., Hialeah, FL).
Soft Agar Assay.
Cells (2.5 x 103) were suspended in 0.3% low-melting point agarose (SeaPlaque; BMA, Rockland, ME) dissolved in DMEM containing 10% CS and plated in 60-mm soft agar plates consisting of DMEM containing 10% CS in a 0.53% agarose medium. Agar plates were carefully placed in the incubator. After 3 weeks, the number of colonies formed with a diameter of >100 µm was scored.
Northern Blot Analysis.
Total RNA was extracted using TRIzol reagent (Invitrogen) according to the manufacturers protocol. Twenty-five µg of total RNA per lane were electrophoresed in a formaldehyde-containing 1% agarose gel and transferred onto a nylon membrane filter (Hybond-N+; Amersham Pharmacia Biotech) by capillary diffusion in 20x SSC. The filter was fixed by UV irradiation and then hybridized overnight at 65°C in a solution containing 7.5% dextran sulfate, 1 M NaCl, 1% N-lauroyl sarcosine, 2.5 µg/ml heat-denatured salmon sperm DNA, and a radiolabeled probe. The filter was washed twice in 0.5x SSC/0.1% N-lauroyl sarcosine at 50°C and subjected to autoradiography.
Quantitative Real-Time RT-PCR.
Total RNA was isolated using the RNeasy mini kit (Qiagen, Valencia, CA) according to the manufacturers recommendations. Five µg of total RNA from each sample were incubated with random primers and Superscript II reverse transcriptase (Invitrogen) to yield cDNA. Real-time RT-PCR was carried out on cDNA using the ABI Prism 7700 Sequence Detection System (TaqMan; PE Applied Biosystems, Foster City, CA). The human GAPDH primers and fluorescence (6-carboxyfluorecein)-labeled probe were used as a control following the manufacturers instructions. TaqMan Universal PCR Master Mix was used in the PCR reaction mixture, and PCR was performed using the following program: 95°C for 10 min; and 40 cycles of 95°C for 15 s and 60°C for 1 min. Specific primers and probes used are as follows: (a) for UbcH1A, 5'-GCAAGAAGGAGAAAGTTGAAGG-3' (forward primer), 5'-GCAAAAACCCAGAAGACCAA-3' (reverse primer), and 5'-CAGCAATTGTAGTAACTGACACATCCTCTCTTTGC-3' (probe); (b) for UbcH1B, 5'-AAGCGGTTACAAGAGGACCCA-3' (forward primer), 5'-GGTGTCCCTTCTGGTCCAAA-3' (reverse primer), and 5'-TGGGTGTCAGTGGCGCACCATCT-3' (probe); (c) for UbcH2, 5'-ACCTCCACCGACCAGAAGAA-3' (forward primer), 5'-GTCCCCGGTACCCTCTTCC-3' (reverse primer), and 5'-AAGAGTACATCCAGAAATACGCCACGGAGG-3' (probe); (d) for UbcH3, 5'-CGATGAGGATGACTCTGGCA-3' (forward primer), 5'-TCTGTCGTCTAAGGAGCCACG-3' (reverse primer), and 5'-CCTGACACCACCAGAATAAACTTGCCGA-3' (probe); (e) for UbcH5A, 5'-CGATCCACCTGCTCACTGTT-3' (forward primer), 5'-TGAGAAAGAAGACTCCACCTTG-3' (reverse primer), and 5'-TGGGAGATGACTTGTTCCACTGGCAAG-3' (probe); (f) for UbcH5B, 5'-ATTGAATGATCTGGCACGGG-3' (forward primer), 5'-TGTCATTTGGCCCCATTATTG-3' (reverse primer), and 5'-TCCAGCACAGTGTTCAGCAGGTCCTGT-3' (probe); (g) for UbcH5C, 5'-AGAGTGAGGAGCCAGACGACA-3' (forward primer), 5'-CTGCAGAACATTGTGCTGGAG-3' (reverse primer), and 5'-ACACACTATGGCGCTGAAACGGATTAATAAGG-3' (probe); (h) for UbcH6, 5'-CAACCAGCAAACCGAGAAAG-3' (forward primer), 5'-GGTGGAGGGTCTAAAGTGATG-3' (reverse primer), and 5'-CCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGC-3' (probe); (i) for UbcH7, 5'-GGCAAGGGCTTATTGTTCCT-3' (forward primer), 5'-AATGTGATCTTCGGTGGTTTG-3' (reverse primer), and 5'-TCCATATGATAAGGGAGCCTTCAGAATCGAA-3' (probe); (j) for UbcH8, 5'-TGCCCATCATCAGCAGTGAG-3' (forward primer), 5'-GGGCTCCCTGATATTCGGTC-3' (reverse primer), and 5'-TGGAAGCCTTGCACCAAGACTTGCC-3' (probe); (k) for UbcH9, 5'-GAGTCCCGCTTTGACTATTTC-3' (forward primer), 5'-TCGTGTTCTGCTCTGTTGGT-3' (reverse primer), and 5'-TGCTGTCTATTTGTTCCCTTTTGACAGACTGC-3' (probe); (l) for UbcH10, 5'-TGGTCTGCCCTGTATGATGT-3' (forward primer), 5'-AAAAGCTGTGGGGTTTTTCC-3' (reverse primer), and 5'-TCCATCCAGAGCCTTCTAGGAGAACCCA-3' (probe); (m) for UbcH12, 5'-ATCCAGACGACCTCCTCAAC-3' (forward primer), 5'-CCATTGTCTCACACTTCACCT-3' (reverse primer), and 5'-CTGTCCTGATGAGGGCTTCTACAAGAGTGG-3' (probe); (n) for UbcH13, 5'-AAGATAAGTGGTCCCCAGCA-3' (forward primer), 5'-GGCTTCGTTGGTCTTCCAC-3' (reverse primer), and 5'-ACAGTTCTGCTATCGATCCAGGCCTTGTT-3' (probe); (o) for UbcH16, 5'-TGGGCTTTGATAGGAATGCAG-3' (forward primer), 5'-GCTCTCTATGCCTCAGTTACTCAGAA-3' (reverse primer), and 5'-TAGTGGCCTTGTCTTCAAAATCATGGGATG-3' (probe); (p) for UbcH17, 5'-ATTCAGCTGCTCATGTCAGAACC-3' (forward primer), 5'-CTGGCATTCTTGAGGAAGGC-3' (reverse primer), and 5'-CCCTGATGACCCGCTCATGGCT-3' (probe); and (q) for UbcH19, 5'-TGCAGAACCACATCCTGAGG-3' (forward primer), 5'-GGAGACTGGTGGAAGCCACA-3' (reverse primer), and 5'-TCTCAGCTTATCCTGGAGGGAATTGGGA-3' (probe).
| RESULTS |
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UbcH10 mRNA Is Expressed at High Levels in Primary Cancerous Tissues of the Lung, Stomach, Uterus, and Bladder.
The elevated level of UbcH10 expression in certain cancerous cell lines suggests that UbcH10 might be expressed at high levels in human primary tumor tissues. Therefore, we performed quantitative real-time RT-PCR to examine the expression level of UbcH10 in various human tumor tissues derived from six lung adenocarcinomas, three gastric adenocarcinomas, two uterine carcinomas, and six bladder carcinomas as well as their corresponding normal tissues. Our results showed that UbcH10 mRNA expression was significantly increased in all of the tumor tissues we examined as compared with the matched normal tissues, suggesting that up-regulation of UbcH10 expression contributes to the occurrence or progression of various human tumors (Fig. 2A)
. To validate the expression changes detected by quantitative real-time RT-PCR analysis, we performed Northern blot analysis with the same RNA samples used for the quantitative real-time RT-PCR analysis. As shown in Fig. 2B
, UbcH10 mRNA (approximately 2.0 kb) was highly expressed in all of the investigated tumor tissues. In contrast, UbcH10 mRNA was expressed at extremely low levels in matched adjacent normal tissues, correlating well with the results obtained by the quantitative real-time RT-PCR analysis for UbcH10.
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| DISCUSSION |
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In our experiments, the expression of UbcH10 in tumor tissues as well as cancerous cell lines was examined by RNA levels. As described by Shekhar et al. (21) , the expression levels of HR6B protein, which is the mammalian homologue of yeast ubiquitin-conjugating enzyme Rad6, in mouse mammary tumor cells were in good agreement with those detected by RT-PCR. Additionally, Arvand et al. (18) reported that endogenous UbcH10 was up-regulated at both the mRNA and protein level in transformed NIH3T3 cells, suggesting that the expression level of UbcH10 mRNA might reflect in part the intracellular level of UbcH10 protein. To confirm our present results, it is necessary to analyze UbcH10 protein levels in tumor tissues as well as cancerous cell lines.
UbcH10 has been identified as a human homologue of the cyclin-selective E2 (E2-C) that is required for the destruction of mitotic cyclins (14, 15, 16) . Townsley et al. (16) described that enforced expression of the dominant-negative type of UbcH10 inhibited the ubiquitination and the subsequent degradation of mitotic cyclins. In accordance with the above-mentioned observations, UbcH10 is functionally associated with the APC, which acts as the E3 ubiquitin ligase to catalyze the transfer of ubiquitin to mitotic cyclins (9 , 14 , 15) . APC is activated during mitosis, remains active throughout the G1 phase, and is degraded at the G1-S boundary (22 , 23) . Intriguingly, Arvand et al. (18) reported that UbcH10 protein was highly expressed in G2-M phase, but its expression level was extremely low in G0-G1 phase. Yamanaka et al. (24) found that UbcH10 that contains the destruction box (D box) underwent APC-dependent degradation at early G1 phase, suggesting that the cell cycle-dependent expression of UbcH10 might be a unique autoregulatory feedback loop for the regulation of APC activity. Considering that the dominant-negative UbcH10 arrests mammalian cells in M phase and inhibits the onset of anaphase, it is possible that the function of UbcH10 is closely linked to cell cycle progression (16) . Thus, the enforced overproduction of UbcH10 might disrupt the autoregulatory feedback loop and thereby lead to deregulated cell growth; however, the precise molecular mechanisms by which UbcH10 promotes cell growth are unclear.
Recently, Shekhar et al. (21) found that overexpression of Ubc2/Rad6 induced anchorage-independent growth of recipient cells, indicating that deregulated expression of Ubc2/Rad6 is involved in malignant transformation. In addition, McDoniels-Silvers et al. (19) reported that the expression levels of Ubc9 were increased in human lung adenocarcinomas compared with those of their corresponding normal tissues. These findings imply that certain E2 proteins might be closely linked to tumorigenesis. As described previously, overexpression of EWS/FLI1 in NIH3T3 cells induced anchorage-independent growth in soft agar medium and generated tumors in nude mice (25, 26, 27, 28) . Of note, Arvand et al. (18) reported that endogenous UbcH10 was up-regulated in NIH3T3 cells transformed with EWS/FLI1 but not in nontransformed NIH3T3 cells, indicating that UbcH10 could play an important regulatory role in the transformation. According to their results, however, stable NIH3T3 transfectants overexpressing mouse UbcH10 did not form colonies in soft agar medium under their experimental conditions. They suggested that other gene products in addition to UbcH10 might be required for cellular transformation. Their findings differ from our present results, which showed UbcH10-induced colony formation in soft agar medium. Intriguingly, they also demonstrated that YAL-7 cells expressing EWS/FLI1 did not grow in soft agar medium, and there existed a significant difference in the EWS/FLI1-mediated induction level ofUbcH10 between NIH3T3 and YAL-7 cells, raising the possibility that a certain threshold level of UbcH10 protein might be required to render cells for being transformed. Although the underlying cause of this discrepancy is not clear, it could be explained in part by the differences in intracellular expression levels of UbcH10 between our stable transfectants and their clones.
Pagano et al. (17) reported that Ubc2/Rad6 and Ubc3/CDC34 were specifically involved in the ubiquitination-dependent degradation of cyclin-dependent kinase inhibitor p27. UbcH7/E2-F1 was reported to support E6-AP-dependent ubiquitination and function in the conjugation and subsequent degradation of tumor suppressor p53 (29, 30, 31) . Thus, it is possible that UbcH10, together with a particular E3 protein(s), might recognize and break down substrate proteins with growth-regulatory function. In this connection, identification of target proteins of UbcH10 should help promote understanding of its role in malignant transformation and tumor cell growth.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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1 Supported by a Grant-in-Aid from the Ministry of Health and Welfare for a New 10-Year Strategy for Cancer Control, a Grant-in-Aid for Scientific Research on Priority Areas, and a Grant-in-Aid for Scientific Research (B) from the Ministry of Education, Science, Sports and Culture, Japan. ![]()
2 To whom requests for reprints should be addressed, at Division of Biochemistry, Chiba Cancer Center Research Institute, 666-2 Nitona, Chuoh-ku, Chiba 260-8717, Japan. Phone: 81-43-264-5431; Fax: 81-43-265-4459; E-mail: akiranak{at}chiba-ccri.chuo.chiba.jp ![]()
3 The abbreviations used are: APC, anaphase-promoting complex; BrdUrd, 5-bromo-2'-deoxyuridine; CS, calf serum; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; RT-PCR, reverse transcription-PCR. ![]()
Received 10/28/02. Accepted 5/ 8/03.
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