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1 Friedrich Miescher Institute for Biomedical Research, Novartis Forschungsstiftung, Basel; 2 Institute of Biochemistry and Genetics, University of Basel, Basel; and 3 Laboratory of Tumor Biology and Genetics, Department of Neurosurgery, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland
| ABSTRACT |
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| INTRODUCTION |
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5ß1 in binding to fibronectin (2)
. Cell shape and actin polymerization determine intracellular signaling, as for example, nonpolymerized actin can induce expression of c-Fos (3) . Upon adhesion to fibronectin, cells spread by polymerizing actin and forming actin stress fibers (reviewed in ref. 4 ). Establishment of actin stress fibers is a complex process that involves, among other mechanisms, RhoA-dependent polymerization of G-actin and actin fiber stabilization by tropomyosins (reviewed in ref. 5 ). On a fibrin-based fibronectin/tenascin-C substratum, RhoA activation was found to be inhibited, which prevented fibroblasts from spreading and from establishing actin stress fibers (6) . Although cells also remain rounded on a fibronectin/tenascin-C substratum, RhoA activation failed to restore actin stress fiber formation (7) , suggesting that a distinct mechanism is responsible for the inhibition of cell spreading on the mixed fibronectin/tenascin-C substratum.
To discover novel mechanisms of tenascin-C action, we describe in this article global changes of transcript levels in tumor cells grown on fibronectin in the presence or absence of tenascin-C to determine substratum-specific signaling pathways involved in the regulation of cell adhesion and proliferation. We found that tenascin-C down-regulates tropomyosin 1 (TM1) expression and that forced expression of TM1 restores cell spreading with the formation of actin stress fibers and focal adhesions. Furthermore, we discovered changes in several transcripts that have an impact on mitogen-activated protein kinase (MAPK) signaling and on Wnt signaling and confirmed that transcript levels corresponded with increased protein expression and the induction of the respective signaling pathways.
| MATERIALS AND METHODS |
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RNA Profiling.
Cells were serum starved for 19 hours and transferred to plates (100 mm; Corning Labware & Equipment, Corning, NY) coated with fibronectin or fibronectin and tenascin-C as described above in medium containing 1% FCS for 12 hours. RNA was extracted using Trizol Reagent (Invitrogen, Groningen, the Netherlands) according to the manufacturers protocol. RNA was additionally purified by the RNeasy protocol (Qiagen, Basel, Switzerland) until an A260 nm:A280 nm absorbance ratio of >1.9 in 10 mmol/L Tris-HCl (pH 7.5) was reached. The integrity of total RNA was checked according to the manufacturers protocol. A total of 10 µg of RNA was processed according to the protocol from Affymetrix and hybridized to the Affymetrix chip HG-U133A. In particular, RNA was reversed transcribed and in vitro transcribed into cRNA in the presence of biotinylated nucleotides. The cRNA was then hybridized to the oligonucleotides on the Affymetrix chip for 16 hours at 45°C, stained with streptavidin phycoerythrin conjugate, and scanned with the Affymetrix GeneChip 2500 scanner. To enforce reproducibility, the same experiment was repeated with a second set of RNA samples that was independently prepared from a different batch of cells giving rise to a total of eight different chip hybridizations.
Data Analysis.
The data generated by the scanner for the eight chips was analyzed to calculate the P values of the 16-way comparison. Candidates that were similarly regulated and with P < 0.003 in at least 11 of 16 comparisons were additionally analyzed. The replicate concordance analysis of the P values was performed using the Friedrich Miescher Institute (FMI) data-mining wizard to remote control the Affymetrix Microarray Suite analysis and to automate the transfer of results into GeneSpring (E. J. Oakeley, software available on request). The expression values were calculated using the Robust Multi-Array Analysis package (8)
, which is part of the BioConductor suite of R. Genes were also required to have a minimum expression of 50 expression units and a detection P of <0.05 in at least one condition and with a fold change of at least 1.5 between the control and the comparative condition. An ANOVA [GeneSpring 6.1 (Silicon Genetics, Redwood City, CA)] with a cutoff of 0.05 was performed on the 399 genes that remained, using a Benjamini and Hochberg false discovery rate multiple testing correction. A total of 373 genes passed this test, and the origins of these statistical differences were investigated using a Tukey posthoc test (Supplemental Table S1). They were classified with the Gene Ontology tool of GeneSpring (Supplemental Table S2).
Quantitative Real-Time Reverse Transcription-PCR (RT-PCR).
For SYBR Green real-time RT-PCR (Applied Biosystems, Foster, CA), a total of 1.5 µg of RNA was reverse transcribed into cDNA using the Omniscript Reverse Transcriptase (Qiagen) following the manufacturers protocol. The following primer sets were used: glyceraldehyde-3-phosphate dehydrogenase, 5'-TCCTCTGACTTCAACAGCGACA-3' and 5'-CGTTGAGGGCAATGCCA-3'; endothelin receptor type A, 5'-GCCATATTTTAGGACAGGTAAAATAACA-3' and 5'-AACACACAAAAGGGCAGTACTTCTT-3'; c-Fos, 5'-GTCCTTACCTCTTCCGGAGATGT-3' and 5'-ACTAACTACCAGCTCTCTGAAGTGTCA-3'; and Dickkopf 1 (DKK1): 5'-CCAAAAACCTGGAGTGTAAGAGCT-3' and 5'-TGCCACACTGAGAATTTACAATACAGT-3'. A single amplification product was obtained per primer set as visualized by ethidium bromide staining after gel electrophoresis (data not shown). Analysis was performed using the QPCR software from Applied Biosystems. The number of cycles necessary to produce a product above background (Ct value) was recorded and, after normalization to the Ct value for glyceraldehyde-3-phosphate dehydrogenase, the relative expression was determined with the formula: relative expression = 10 (
Ct/3.3).
Semiquantitative RT-PCR.
Total RNA was prepared with the RNeasy kit (Qiagen) according to the manufacturers protocol from 4/5-confluent T98G and T98G:DKK1 cells that were grown for 20 hours in DMEM containing 10% FCS. The first-strand cDNA synthesis was done with the SuperScript II RT kit (Life Technologies, Inc., Rockville, MD), and random primer N6. PCR (35 cycles) was done at 57°C with specific primers 5'-GGATATCCCAGAAGAACCACACTGACTT-3' and 5'-CACTGAAGATTCCTACATCCTTGGGATT-3' (DKK1) and 5'-ACCACAGTCCATGCCATCAC-3' and 5'-TCCACCACCCTGTTGCTGTA-3' (glyceraldehyde-3-phosphate dehydrogenase), respectively, on 1 of 10 of 2.6 µg of in vitro-transcribed RNA. As a positive control served 185 ng of DKK1 plasmid.
Western Blotting.
Proteins were lysed in radioimmunoprecipitation assay buffer, and equal amounts (10 µg) as determined by Bradford assay (Bio-Rad Laboratories, Hercules, CA) were separated in 4 to 12% precasted Tris-Bis gels (Invitrogen), transferred onto Immobilon-P (Millipore, Bedford, MA) polyvinylidene difluoride membrane. Equal loading was visualized by Ponceau-S (Sigma) staining and confirmed by Western blotting for extracellular signal-regulated kinase (ERK) or
-tubulin. Membranes were blocked with 5% horse serum (Fluka, Milwaukee, WI) in PBS and incubated with antibodies against high molecular weight tropomyosins TM1-3 (mouse; Sigma),
-tubulin (mouse; Calbiochem, San Diego, CA), endothelin receptor type A (rabbit; Calbiochem), ß-catenin [mouse; Transduction Laboratories (Lexington, KY) and BD Biosciences, Basel, Switzerland], non-phospho-ß-catenin (clone 8E4, mouse; Upstate Biotechnology, Lake Placid, NY), ERK/MAPK (rabbit; Calbiochem), phospho-ERK/MAPK (mouse; Calbiochem), Id2 (mouse; Transduction Laboratories, BD Biosciences) and the secondary horseradish peroxidase-conjugated antimouse and antirabbit antibodies (Amersham, Piscataway, NJ). The signals from Western blotting for ß-catenin were scanned with an Agfa Arcus Scanner (Agfa Gevaert N.V., Kontich, Belgium). Densitometric analysis was performed with the Scion Image Software (Scion Corporation, Frederick, MD).
Immunofluoresence.
Serum-starved cells were transferred onto substrata-coated dishes (4-well Cellstar; Greiner, Frickenhausen, Germany) in serum-free or 1% FCS containing medium, fixed with 4% paraformaldehyde, blocked with 5% horse serum, 0.5% Tween-20 in PBS, and incubated with the indicated antibodies (see above) or with tetramethylrhodamine isothiocyanate-phalloidin (Sigma), antivinculin (mouse; Sigma) and followed by incubation with tetramethylrhodamine isothiocyanate- and FITC-coupled goat antimouse and goat antirabbit antibodies (Alexa, Molecular Probes, Eugene, OR).
Transfection.
To generate stable transfectants T98G:TM1 and T98G:DKK1, cells were transfected with 1 µg of mouse DKK1 cDNA in pcDNA3.1 (gift from Cathrin Brisken; ISREC, Lausanne, Switzerland) and 1 µg of mouse TM1 cDNA in pCGE (9)
together with 0.01 µg of the pCIneo plasmid (Invitrogen), respectively. Cells were selected with G418 and overexpression of DKK1, and TM1 was determined by semiquantitative RT-PCR, Western blotting, and immunofluorescence, respectively. Subclones of T98G:TM1 were obtained by limited dilution.
Immunohistochemistry and Tissue Array.
Tissue arrays have been constructed from archived paraffin blocks at the University Hospital in Lausanne, Switzerland, as described previously (10)
. The tissue arrays are composed of 190 glioblastoma multiforme (WHO grade 4) and 158 lower grade gliomas (WHO grades 1 to 3). The histopathology of all cases was reviewed by Robert C. Janzer, neuropathologist (Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland). Immunohistochemical determination for tenascin-C (monoclonal, B28.13, dilution 1:2500; ref. 11
) and Id2 (1:10,000) was performed according to standard procedures for paraffin sections using a high temperature epitope retrieval technique in citrate buffer (pH 6.0; pressure cooker, 3 minutes) and overnight incubation with the primary antibody. The immunostaining was scored semiquantitatively in a range of 0 to 3, independently by two researchers. Low (score 0 to 1) versus high expression score (2 to 3) was retained for statistical analysis by Fishers exact test. In this study, we excluded gliomas WHO grade 3 and samples that were differently scored.
| RESULTS |
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(12)
little is known about how adhesion to tenascin-C alters intracellular signaling and causes enhanced tumor cell proliferation. To analyze global changes of gene expression by exposure of cells to tenascin-C, we performed an RNA profiling experiment. T98G cells were seeded onto fibronectin in the presence or absence of tenascin-C. RNA was prepared 12 hours after growth on the two substrata. After reverse and subsequent in vitro transcription, the cRNA was hybridized to the Affymetrix chip HG-U133A, and differentially expressed genes were identified using the Affymetrix Microarray Suite 5, FMI data analysis wizard and GeneSpring 5.1 programs. A total of 373 of the >24,000 genes passed the statistical analysis (see Materials and Methods) and were considered to be significantly up- or down-regulated on the fibronectin/tenascin-C substratum in comparison to fibronectin alone (Fig. 1
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-tubulin, vimentin, and vinculin (data not shown), which confirms ERK1/2 as suitable loading control. The difference in phosphorylation was apparent only after 12 hours but was not present after 4 and 8 hours (data not shown), suggesting that ERK1/2 activation triggered by tenascin-C is an event that occurs later after cell adhesion to the fibronectin/tenascin-C substratum. A known downstream target of the endothelin receptor type A/MAPK pathway is c-Fos (reviewed in ref. 14
). The RNA profiling experiment revealed an up-regulation of this molecule in dependence of tenascin-C (Table 1)
2.5-fold in T98G cells grown on fibronectin/tenascin-C for 12 hours in comparison to fibronectin (Table 4)
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Because DKK1 expression was reduced by tenascin-C we wanted to know whether ß-catenin was stabilized in the presence of tenascin-C. To investigate ß-catenin stability, we used Western blotting and found that the protein levels of total ß-catenin (Fig. 4A)
and of stabilized non-phospho-ß-catenin encompassing Ser37, whose unphosphorylated state correlates with enhanced in vitro transactivation activity (refs. 18, 19, 20
; Fig. 4B
) were enhanced several fold in cells grown in the presence of tenascin-C for 4 and 12 hours in comparison to those cells grown in the absence of tenascin-C. This is consistent with the stronger ß-catenin immunostaining of cells attached to fibronectin/tenascin-C than of cells attached to fibronectin (Fig. 4C)
. Moreover, in cells plated on fibronectin, ß-catenin was accumulated at the cell membrane, whereas ß-catenin appears to be localized to nuclei of cells grown on the tenascin-C containing substratum (Fig. 4C
, arrow). These observations suggests that ß-catenin expression and localization is regulated in T98G cells. Because expression of ß-catenin was enhanced in cells grown on the fibronectin/tenascin-C substratum, we next sought to determine whether ß-catenin activated transcription of TCF/LEF target genes in T89G cells. This possibility was supported by the enhanced expression of three known ß-catenin/TCF target genes ubitorax (21)
, TCF/LEF1 (22)
, and Id2 (ref. 23
; Table 1
). We were able to confirm a very marked, tenascin-Cspecific Id2 induction by Western blotting (Fig. 4D)
. ERK1/2 expression levels, which were used as a loading control, were similar on the two substrata (Fig. 4D)
. In contrast to Id2, ubitorax, and TCF/LEF1, other Wnt signaling target genes such as c-myc and cyclin D1 were not induced by tenascin-C. The differential activation of Wnt target genes by tenascin-C suggests that several signaling events are triggered by tenascin-C that may influence each other.
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-tubulin expression was similar (Fig. 5, B and C)
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| DISCUSSION |
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in MCF7 breast carcinoma cells (12)
, nothing is known about how tenascin-C alters the expression of intracellular molecules involved in signaling pathways associated with proliferation. We addressed this question in T98G glioblastoma cells for which we recently showed that tenascin-C stimulates tumor cell proliferation by inhibiting syndecan-4 as coreceptor in integrin signaling (2)
. Here, we determined the RNA expression profile by Affymetrix chip hybridization of RNA prepared from T98G glioblastoma cells that were growth stimulated on a fibronectin/tenascin-C substratum and compared it to cells with a lower proliferation index grown on fibronectin. Our analysis revealed reproducible and profound changes in the expression profile of genes that are linked to proliferation and tumorigenesis and that are involved in signal transduction, transcription, actin cytoskeleton remodeling, cell cycle regulation, chromatin organization, and maintenance of genomic integrity. On the other hand, tenascin-C did not alter transcriptional regulation of genes linked to apoptosis. A RNA profiling approach reveals differential expression of many candidates genes. It is obvious that one needs to focus on a few potentially important candidates. Here, we addressed tenascin-C-specific expression of five candidate genes and confirmed their expression deduced from the Affymetrix chip hybridization data, which supports reliability of the RNA profiling results.
Cytoplasmic signaling is induced upon cell adhesion to adhesive extracellular matrix molecules and involves activation of small GTPases, c-Jun NH2-terminal kinase, phosphatidylinositol 3'-kinase, and ERK/MAPK (reviewed in ref. 28
). The associated pathways are often found to be deregulated in tumor cells. Our study reveals novel links of tenascin-C to gene expression and tumor growth promoting signaling events. In particular, tenascin-C stimulates activation of ERK1/2, which phosphorylates and activates ELK-1 and c-Fos (AP1), two transcription factors that are directly involved in induction of genes driving proliferation (reviewed in ref. 29
), and indeed, c-Fos expression is elevated in the presence of tenascin-C. Moreover, our study showed that Sox4 and CASK were induced by tenascin-C (Table 1)
. Both molecules form nuclear complexes, Sox4 with syntenin (30)
and CASK with Tbr1 (31)
, respectively, and function as transcriptional regulators of target genes. Because both complexes are implied in syndecan signaling (32)
and fibronectin-induced syndecan-4 adhesion signaling is blocked by tenascin-C (2)
, it will be interesting to see whether these complexes have an altered transactivation activity in cells grown on a fibronectin/tenascin-C substratum in comparison to cells grown on fibronectin. The fact that expression of two molecules involved in syndecan signaling is regulated by tenascin-C is intriguing and supports an important role of tenascin-C in affecting the coreceptor function of syndecan-4 in integrin signaling.
Cell adhesion to fibronectin in the presence of tenascin-C profoundly changes cell shape in comparison to cells attached to fibronectin: cells are impaired in cell spreading and do not form actin stress fibers on the fibronectin/tenascin-C substratum (reviewed in ref. 1 ). One underlying mechanism might include the down-regulation of TM1 by tenascin-C. Tropomyosins are a family of actin-binding proteins that stabilize actin microfilaments (reviewed in ref. 33 ). They can be grouped into a high and a low molecular weight (Mr) species. In nonmuscle cells such as fibroblasts and epithelial cells, multiple high Mr TMs are expressed which are referred to as TM1, TM2, and TM3. TMs are rod-shaped molecules that bind to actin, thereby stiffening actin filaments and preventing their depolymerization (reviewed in ref. 34 ). TM1 can be phosphorylated (35) and acetylated (36) and both modifications enhance actin filament binding. Upon experimental cellular transformation, TM1 expression is often found to be down-regulated and correlates with the lack of actin stress fiber formation (37) . TM1 expression in src-transformed cells restored cell spreading with the formation of actin stress fibers and focal adhesions. Moreover, these cells lost their anchorage-independent growth upon TM1 expression (38) . These results together with the observation that TM1 is down-regulated in prostate carcinoma (39) , breast carcinoma (40) , and in highly malignant central nervous system tumors (41) suggest that TM1 behaves as tumor suppressor (42) .
The importance of TM1 in actin fiber stabilization is supported by our experiments showing that overexpression of TM1 rescued cell spreading on fibronectin/tenascin-C, including the formation of actin stress fibers and focal adhesions. This is in contrast to TM2 and TM3, which failed to rescue focal adhesion formation on the fibronectin/tenascin-C substratum.4 High Mr TMs, including TM1, were found to be down-regulated or absent in 77% of high-grade pediatric astrocytomas and adult glioblastomas in contrast to lower grade astrocytomas (41) . Because of the well-described tumor suppressor activity of TM1, the high expression of tenascin-C in glioblastoma (10 , 43) , and our observation that tenascin-C down-regulates TM1, it will be interesting to see whether reduced TM1 levels contribute to tumorigenesis of gliomas.
Another growth promoting signaling pathway that is affected by tenascin-C is the Wnt signaling pathway. Besides the involvement of integrin-linked kinase ILK (reviewed in ref. 44 ), little is known about how cell adhesion to the extracellular matrix affects the canonical Wnt/Frz signaling pathway, which is intimately involved in cellular transformation and cancer (reviewed in ref. 15 ). Upon binding of Wnt to its cognate receptor complex Frz/LRP5/6, a phosphorylation signaling cascade is induced that leads to suppression of ß-catenin degradation by the proteasome. Thus, ß-catenin can translocate to the nucleus where it changes the TCF/LEF/groucho repressor complex into a transcriptional activator and increases expression of target genes (reviewed in ref. 15 ). The Wnt/Frz signaling pathway is tightly regulated by molecules that prevent receptor/ligand complex formation. These include DKK1, which, together with Kremen, sequesters LRP5/6, an important coreceptor of Frz (17) .
Our data suggest that tenascin-Cspecific down-regulation of DKK1 is responsible for stabilization of ß-catenin, which leads to enhanced transcription of TCF/LEF target genes ubitorax, TCF/LEF1, and Id2. Interestingly, Id2 is a negative transcriptional modulator, which, due to the lack of a DNA binding domain, inhibits other basic helix-loop-helix transcription factors through heterodimerization (reviewed in ref. 45 ). Id2 can induce cellular transformation and proliferation. Among other mechanisms, enhanced proliferation by Id2 seems to be caused by binding of Id2 to members of the E2F family, thereby deregulating their effect on the cell cycle machinery (reviewed in ref. 46 ). Expression of Id13 is significantly higher in high-grade compared with lower grade astrocytic tumors and correlates with higher proliferation indices (47) . Our immunohistochemical study, using tissue arrays of a large number of glioblastomas and lower grade gliomas, confirms and extends this observation and shows a link between high tenascin-C and high Id2 expression in the majority of glioblastomas, whereas the majority of lower grade gliomas expressed little or no tenascin-C and little or no Id2. Taken together, these observations raise the possibility that activation of the wnt signaling pathway and especially increased expression of the Wnt target Id2 might play an important role in tumorigenesis of astrocytes leading to gliomas.
Thus far, it was unclear how binding of tumor cells to fibronectin attenuates their growth in cell culture and in vivo (48)
. Our data raise the interesting possibility that adhesion of tumor cells to fibronectin represses Wnt signaling, thus attenuating tumor cell proliferation. Cell binding to fibronectin occurs mainly through integrin
5ß1 and requires syndecan-4 (49)
. Whether inhibition of the cell adhesion function of syndecan-4 by tenascin-C is responsible for DKK1 down-regulation and induction of wnt signaling remains to be determined.
In summary, our results suggests that tenascin-C enhances tumor cell proliferation by several mechanisms that include disruption of the actin cytoskeleton through reduced TM1 expression and alteration of gene expression through derepression of Wnt signaling and activation of MAPK signaling. Whether altered signaling by tenascin-C involving these pathways contributes to in vivo tumorigenesis remains to be determined.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Requests for reprints: Gertraud Orend, Institute of Biochemistry and Genetics, University of Basel, Vesalgasse 1, 4051 Basel, Switzerland. Phone: 41-61-267-35-41; Fax: 41-61-267-35-66; E-mail: Gertraud.Orend{at}unibas.ch
4 E. Fluri and G. Orend, unpublished observations. ![]()
Received 4/ 8/04. Revised 7/28/04. Accepted 8/10/04.
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