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Cell and Tumor Biology |
Department of 1 Surgery, Division of Oncology, and 2 Department of Pathology, School of Medicine, and 3 Department of Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, California
Requests for reprints: Mai N. Brooks, University of California at Los Angeles, Box 951782, Los Angeles, CA 90095. Phone: 310-206-2215; Fax: 310-825-7575; E-mail: maibrooks{at}mednet.ucla.edu.
| Abstract |
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| Introduction |
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Another important biological phenomenon in the tumorigenic and metastatic phenotype involves the process of angiogenesis. Three decades of experimental evidence has shown that the growth and metastasis of solid tumors is dependent on their ability to initiate and sustain new capillary growth (i.e., angiogenesis; ref. 3). Multiple clinical observations in human cancer have added support to the hypothesis that tumors are angiogenesis dependent. The number of vessels in a tumor specimen correlates with the disease stage and can add prognostic value independent of other routinely used markers (4). Furthermore, the levels of various angiogenic factors in bodily fluids have been shown to correlate with prognosis in cancer patients (57). Many agents have been developed to inhibit tumor angiogenesis, and there have been reports of some encouraging results (8, 9).
Several researchers, including our laboratory, have investigated the difference between molecules of the proliferating tumor endothelium and those of the normal quiescent endothelium (10, 11). To closely mimic a tumor environment, we have attempted to identify endothelial gene products expressed in response to a mixture of growth factors found in tumor-conditioned media. Toward this goal, we used a subtraction hybridization method called suppression subtractive hybridization (12). In human umbilical vein endothelial cell populations exposed to conditioned media from human cancer cells (13) for 4 hours, we have isolated multiple clones (14, 15). One of these differentially expressed genes is endothelial-derived gene 1 (EG-1; ref. 16). In addition to its expected presence in blood vessels, EG-1 expression is significantly elevated in the epithelial cells of several cancers including breast, colorectal, and prostate cancer (17). In this article, we present in vitro and in vivo data which suggest that EG-1 stimulates cellular proliferation and may be involved in signaling pathways involving Src and mitogen-activated protein (MAP) kinase (MAPK) activation.
| Materials and Methods |
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Proliferation assay. The cells were plated onto 48-well culture plates at 10,000 cells/well and incubated at 37°C in 5% CO2 for 48 hours in DMEM with 10% FCS. On the third day, 1 µCi of [methyl-3H]thymidine (Amersham, Piscataway, NJ) was added to each well. Approximately 15 hours later, the plates were washed with PBS. The cells were fixed with trichloroacetic acid, washed with ethyl alcohol, and lysed with sodium hydroxide. After adding glacial acetic acid, the radioactivity of the cell lysates was counted in scintillation solution (ScintiVerse, Fisher, Pittsburgh, PA). The in vitro assays were done in triplicates. Certain experiments were carried out with MAPK inhibitors (PD98059, SB203580, and U0126) purchased from Calbiochem (La Jolla, CA). The cells were treated with 10 µmol/L of one of the above inhibitors for 24 hours before harvest.
Transfection. We used the pcDNA3.1D/V5-His-TOPO vectors (Invitrogen) to carry the full-length human EG-1 gene according to the instructions of the manufacturer. Empty vectors were used as negative controls. Specifically, standard calcium-phosphate DNA coprecipitation was used for obtaining stable transfectants. Individual clones were selected for Geneticin (Invitrogen) resistance over a period of several weeks. Expression of the EG-1 gene by individual clones was confirmed by Northern and Western blot analyses.
For transient transfection, we used the pcDNA3.1D/V5-His-TOPO and pShuttle-IRES-hrGFP-1 (Stratagene, La Jolla, CA) vectors to carry the full-length EG-1 gene. Empty vectors were used as negative controls. Liposomal reagents were used to transfect the pcDNA3.1D/V5-His-TOPO vectors into cells using the MBS Mammalian Transfection Kit according to the protocol of the manufacturer (Stratagene).
Small interfering RNA. EG-1 expression knockdown was achieved by transfecting a lentivirus vector expressing a small interfering RNA (siRNA) against EG-1, cis-linked with a green fluorescent protein expression cassette, into HEK-293 cells or breast cancer cells. The pCSUECG plasmid (U6-shRNA-EG1-CMV-GFP) was constructed by ligating the BamHI/EcoRI digests of pCSCG and the U6-shRNA-EG1 PCR product. The U6-shRNA-EG1 PCR was done using a hU6-containing plasmid at an annealing temperature of 60°C with the primers 5'-GGGGGATCCCAAGGTCGGGCAGGAAGAGGGCCTATTTCC-3'; for siRNA1, 5'-GGGGAATTCAAAAAGAAATTCGAACCGGTGTTGTCTCTTGAACAACACCGGTTCGAATTTCGGTGTTTCGTCCTTTCCACAAGATATATAAA-3'; for siRNA2, 5'-GGGGAATTCAAAAAGTTTCTGGATATTGCAAGATCTCTTGAATCTTGCAATATCCAGAAACGGTGTTTCGTCCTTTCCACAAGATATATAAA-3'; and for siRNA3, 5'-GGGGAATTCAAAAAGAGGATGTGTCAGAACTAATCTCTTGAATTAGTTCTGACACATCCTCGGTGTTTCGTCCTTTCCACAAGATATATAAA-3'.
Mouse tumor model. Severe combined immunodeficient (SCID) mice were bred in a pathogen-free colony at the University of California at Los Angeles School of Medicine. Eight- to ten-week-old female mice were housed four per cage, and fed ad libitum with sterilized food pellets and sterile water. We injected cells s.c. into the flank of the mice. We examined the effect of EG-1 on the tumorigenicity of HEK-293 cells. Wild-type, stably transfected empty vector or EG-1overexpressing clones (4 x 107-5 x 107 cells) were injected s.c. into the flank of SCID mice. The tumor size was measured in three dimensions with calipers starting at day 7. The mice were observed for any change in behavior, appearance, or weight. At the end of the experiment, the mice were sacrificed by nitrogen gas environment. The primary tumor tissues were fixed in 10% formalin and converted into paraffin blocks.
Generation of antibodies. Polyclonal antibodies that recognize five different epitopes on human EG-1 were generated by Washington Biotechnology (Baltimore, MD). Briefly, different antigenic peptide fragments of human EG-1 were synthesized and used to immunize the rabbits. Preimmune and immune sera were harvested. Polyclonal antibodies were also affinity purified. For Western blot analysis, the secondary antibody used was horseradish peroxidaseconjugated goat anti-rabbit immunoglobulin G (IgG) from Jackson ImmunoResearch (West Grove, PA). The anti-FLAG M2 antibodies were obtained from Sigma (St. Louis, MO). The antibodies against MAPK and phospho-MAPK, c-jun-NH2-kinase (JNK) and phospho-JNK, p38 and phospho-p38, and Src were purchased from Cell Signaling (Beverly, MA).
Immunohistochemistry. Paraffin-embedded specimens were cut into 5 µm sections, then baked at 65°C for 30 minutes. H&E preparations of each specimen were done to confirm the presence of nonnecrotic tumor. The paraffin was removed by incubation in xylene, followed by graded alcohols. Immunostaining was done with the DAKO Envision peroxidase rabbit ready-to-use system. The slides were sequentially incubated at room temperature as follows: (a) in DAKO antigen block reagent to block nonspecific antibody binding; (b) with the specific primary antibody for 1 hour; (c) with the DAKO secondary antibody to rabbit for 30 minutes; and (d) developed with DAKO diaminobenzidine solution. The tissues were then stained with Gill's hematoxylin, dehydrated through graded alcohols, and mounted. For EG-1 studies, we used antigen retrieval with 0.01 mol/L sodium citrate (pH 6.0) in a 95°C water bath for 20 minutes. The EG-1 antiserum was used at 1:400 dilution, and EG-1 affinity-purified polyclonal antibodies at 1:2,000. The negative control was preimmune rabbit serum at 1:400 dilution. The histologic slides were reviewed by a Board-certified pathologist (J.Y.R.). Photography was carried out with a Leica DMLS microscope (McBain Instruments, Chatsworth, CA) and a Nikon CoolPix 995 digital camera (Tokyo, Japan).
Western blot analysis. Cell pellets were lysed in preheated 0.025 mol/L Tris (pH 7.4), 0.001 mol/L EDTA, and 0.3% SDS, and then boiled for 5 minutes. The cell lysate was centrifuged at 12,000 x g for 10 minutes, and the supernatant was saved. Protein concentration was measured by the Bradford assay (Bio-Rad, Hercules, CA). For Western blot analysis,
40 µg of protein were separated by a 12% SDS-PAGE gel, and transferred to a nitrocellulose membrane by electrophoretic blotting. The membrane was blocked overnight (4°C) with 5% nonfat dry milk in TBS-0.1% Tween 20, and then incubated with a 1:500 dilution of EG-1 antiserum for 2 hours. The blots were then washed thrice over 30 minutes in TBS-Tween 20, and incubated for 1 hour with horseradish peroxidaseconjugated secondary antibody goat anti-rabbit IgG (1:10,000), and then washed in TBS-Tween 20 as before. The membranes were then developed using the Supersignal West Pico Chemiluminescent Western blotting detection system according to the instructions of the manufacturer (Pierce, Arlington Heights, IL).
Immunoprecipitation. Cell lysates were preincubated solely with protein A/G Plus-Agarose (Santa Cruz Biotechnology, Santa Cruz, CA) at 4°C for 1 hour, and the mixture was centrifuged at 3,000 x g for 5 minutes to pellet these beads and any nonspecific interacting proteins. One milligram of supernatant protein was incubated with antiEG-1 antibody and 30 µL of protein A/G Plus-Agarose overnight at 4°C under agitation, and 1 mg of proteins from the same source was incubated with normal rabbit IgG (Santa Cruz Biotechnology) and protein A/G Plus-Agarose (for negative controls). After incubation, immunocomplexes were pelleted by centrifugation at 3,000 x g for 5 minutes at 4°C. The pellets were then resuspended and washed three additional times with immunoprecipitation buffer to remove nonspecific interactions. Laemmli loading buffer was then added to the beads. After boiling, the proteins were separated by 12% SDS-PAGE and analyzed by Western blot.
Size exclusion chromatography-mass spectrometry. Anti-FLAG M2 affinity gel (Sigma) was used to purify recombinant FLAG-tagged EG-1 peptide from transiently transfected HEK-293 cells, following the protocol of the manufacturer. Briefly, cell lysates were collected and loaded onto the column under gravity flow. The column was washed and then eluted with seven 1-mL aliquots of 0.1 mol/L glycine-HCl at pH 3.5 into vials containing 25 µL of 1 mol/L Tris (pH 8.0). The vial with the highest concentration of the EG-1 protein (vial 2) was subjected to mass spectrometry (MS).
The protocol of Whitelegge et al. (18) was used to separate the EG-1 from salt by size exclusion chromatography before analysis in the mass spectrometer (size exclusion chromatography-MS). Approximately 10 µg of EG-1 suspended in 0.1 mol/L glycine-HCl at pH 7.0 were dried down in vacuo (SpeedVac) and then resuspended in 100 µL of 90% formic acid immediately before size exclusion chromatography-MS. The size exclusion chromatography was done using a mobile phase of CHCl3/methanol/1% aqueous formic acid (4:4:1, v/v/v) and a Super SW 2000 column (4.6 x 300 mm, Tosoh Bioscience, Montgomeryville, PA) at 250 µL/min and 40°C. Before delivery to the electrospray-ionization source, the column effluent was monitored with a UV detector (280 nm). Electrospray ionization MS was done using a triple quadrupole instrument (API III, Applied Biosystems) tuned and calibrated as described (19). Data were processed using MacSpec 3.3, Hypermass, and BioMultiview 1.3.1 software (Applied Biosystems).
Microliquid chromatography with tandem mass spectrometry. After the EG-1 peptides were eluted from the FLAG column, we confirmed the presence and purity of EG-1 by Western blotting. Then the sample was subjected to 12% SDS-PAGE, and the gel was stained by SYPRO Ruby Protein Gel Stain (Molecular Probes, Eugene, OR) following the manual from the manufacturer. Subsequently, the EG-1 bands were excised and dehydrated in acetonitrile for 30 minutes, and dried completely by SpeedVac. DTT (10 mmol/L) dissolved in 100 mmol/L NH4HCO3 was added to the sample, which was then incubated for 1 hour at 56°C. The liquid was removed, and 55 mmol/L iodoacetamide dissolved in 100 mmol/L NH4HCO3 was added for 45 minutes at room temperature in the dark. The sample was washed in 100 mmol/L NH4HCO3 for 10 minutes, dehydrated in acetonitrile for 30 minutes, followed by swelling in 100 mmol/L NH4HCO3 for 30 minutes, dehydrated again in acetonitrile for 30 minutes, and finally dried completely by SpeedVac. Then, the sample was digested in trypsin solution (50 mmol/L NH4HCO3, 5 mmol/L CaCl2, 12.5 ng/µL trypsin) on ice for 45 minutes. The liquid was then removed, and the sample incubated in the same solution without trypsin at 37°C overnight. On the following day, the sample was washed with 20 mmol/L NH4HCO3; then the extraction of the EG-1 peptides was carried out with 5% formic acid and 50% acetonitrile for 20 minutes, and repeated twice. The sample was extracted once with acetonitrile for 20 minutes. All the postigestion extractions were pooled together and dried down by SpeedVac.
Samples were analyzed by microliquid chromatography with tandem mass spectrometry (micro-LC-MS/MS) with data-dependent acquisition (LCQ-DECA, ThermoFinnigan, San Jose, CA) after dissolution in 5 µL of 70% acetic acid (v/v). A reverse-phase column (200 µm x 10 cm; PLRP/S 5 µm, 300 Å; Michrom Biosciences, San Jose, CA) was equilibrated for 10 minutes at 1.5 µL/min with 95% A, 5% B (A, 0.1 % formic acid in water; B, 0.1% formic acid in acetonitrile) before sample injection. A linear gradient was initiated 10 minutes after sample injection ramping to 60% A, 40% B after 50 minutes and 20% A, 80% B after 65 minutes. Column eluent was directed to a coated glass electrospray emitter (TaperTip, TT150-50-50-CE-5, New Objective) at 3.3 kV for ionization without nebulizer gas. The mass spectrometer was operated in "triple-play" mode with a survey scan (m/z 400-1,500), data-dependent zoom scan and MS/MS. Individual sequencing experiments were matched to a custom protein sequence database using Sequest software (ThermoFinnigan).
Statistical analysis. Descriptive statistics, such as mean and SE, were used to summarize the results. The ANOVA test was done for comparison among the various groups followed by the Bonferroni posttest. The Student's t test was used for comparison between only two groups. Statistical significance is defined by P < 0.05.
| Results |
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To confirm the size of the EG-1/FLAG tag transfectant product, we did size exclusion chromatography-MS. Figure 1D shows the zero charge deconvoluted electrospray ionization mass spectra of EG-1. The measured mass of 21,218.0 Da is within 0.01% of that calculated for a monoacetylated (M ± 42 Da) form of EG-1 (21,218.8 Da; average mass) based on analysis using the ExPASy Proteomics Server (Swiss Institute of Bioinformatics).
Micro-LC-MS/MS was done so that peptides generated from a tryptic digest of the FLAG Tag EG-1 peptide could be searched against the protein sequence database using Sequest (ThermoFinnigan). Peptides uniquely matching the EG-1 sequence are shown in Table 1. No significant matches with proteins other than EG-1 were found.
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3-fold as much of the 22 kDa EG-1/FLAG peptide, in comparison with empty vectortransfected cells.
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Overexpression of EG-1 stimulates breast cancer cell proliferation. We transiently transfected a full-length cDNA of EG-1 carrying a FLAG tag into the human breast cancer cell lines MCF-7 and MDA-MB-231. Subsequent experiments showed that the EG-1transfected MCF-7 cells have increased proliferation (9,613 ± 694 cpm) in comparison with the ones transfected with empty vectors (7,213 ± 252 cpm). Cotransfection with EG-1 and siRNA3 abrogated the increased proliferation (5,947 ± 264 cpm, P = 0.0002; Fig. 3A). The same phenomenon was observed with MDA-MB-231 cells transfected with empty vector (34,651 ± 3,756 cpm), with EG-1 (61,605 ± 2,288 cpm), and with EG-1 and siRNA3 combination (34,197 ± 429 cpm, P < 0.0001; Fig. 3C). Figure 3B and D shows the corresponding levels of EG-1 peptide in these cells, as shown with Western blot analysis of cell lysates.
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EG-1 overexpression influences certain kinase pathways. Western blot analysis of cell lysates showed that the phosphorylated p44/42 MAP kinase level is elevated in EG-1transfected HEK-293 cells in comparison with those transfected with empty vector (Fig. 5A). The phosphorylated forms of the JNK (Fig. 5B) and the p38 kinase (Fig. 5C) are similarly increased in EG-1overexpressing cells. Of note, we also observed similar changes in phospho-JNK levels in MCF-7 cell experiments, and in p44/42 MAPK levels in MDA-MB-231 cell experiments (data not shown). We further investigated the proliferation of EG-1transfected HEK-293 cells when treated with the following MAPK inhibitors: PD98059 (inhibits MAPK), SB203580 (inhibits p38), and U0126 (inhibits MAP/extracellular signal-regulated kinase (ERK) kinase 1 and 2). These inhibitors significantly block the increase of proliferation by EG-1 overexpression in HEK-293 cells (Fig. 5D; P < 0.05).
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| Discussion |
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Our present observations are unique in part because EG-1 is a novel gene with completely unknown function, which was discovered in our laboratory 2 years ago. The fact that this gene is highly conserved in mammals suggests that it may serve an important and fundamental role in cellular biology. The EG-1 protein product is unique because we could not find any homology of its tryptic peptides with any known proteins in the database. Thus, the major finding is that a unique and novel gene is a positive signal for cellular proliferation. The extent of proliferation correlates with the levels of EG-1 peptide, as seen in Western blot analyses in vitro and immunohistochemistry in vivo. As further evidence for the stimulatory effect of EG-1, we showed that the knockdown of EG-1 expression by specifically designed siRNAs resulted in inhibition of cellular proliferation.
To investigate possible mechanisms for the stimulatory activity of EG-1, we analyzed the well-known MAPK family kinase signaling pathway which has been shown to be crucial in promoting cellular proliferation (20). We used the stable clones that overexpress EG-1, and compared their MAPK activity with that expressed by stable clones carrying only empty vectors. By Western blot analysis, we found that EG-1 overexpression was correlated with activation of the following MAP kinases: ERK-1 and -2, JNK, and p38. Further work is needed to study the network involved in this interaction, and to determine whether the MAPK pathway really plays a role in EG-1associated cellular proliferation.
A key to the understanding of cellular signal transduction pathways is to determine whether certain proteins of interest interact with one another. Protein-protein interactions are often mediated by noncatalytic and conserved domains (21). To further clarify the function of EG-1, we analyzed the sequence of this highly conserved gene. EG-1 has two tyrosines at positions 68 and 163. The presence of an NH2-terminal polyproline region suggests that EG-1 may interact with Src homology 3 domains. This led us to screen more than 100 proteins with Src homology 3 domains by domain array assays, in which we repeatedly observed an association between EG-1 and c-Src (data not shown). Immunoprecipitation with anti-Src antibody, followed by immunoblotting with antiEG-1 antibody, showed an interaction between these two molecules. c-Src is a member of the Src family of cytoplasmic tyrosine kinases that regulate cell growth, differentiation, cell shape, migration, and survival (22). c-Src has been reported to be overexpressed and to play a role in human carcinomas of the breast, colon, and others (23). Src family tyrosine kinases are often activated by receptor tyrosine kinases, such as epidermal growth factor receptor or platelet-derived growth factor receptor (24). Further work is needed to elucidate the effects of the observed association between Src and EG-1.
The above observations collectively support the hypothesis that the novel gene EG-1 is a positive stimulator of cellular proliferation. Because cellular proliferation is an important component of the malignant phenotype, our present findings suggest that EG-1 may be an important target in the design of novel cancer therapies. In addition, we have now shown that EG-1 overexpression is potentially associated with the well-known MAP kinase family signaling pathway, which could underline the mechanism of the function of EG-1. Finally, we have observed that EG-1 forms protein-protein complexes with the Src tyrosine kinase, which is critical in the regulation of cell growth, differentiation, migration, and survival. The cross-talk between MAPK family and c-Src has been reported by several groups (25, 26). When c-Src is catalytically active, it is presumed to phosphorylate epidermal growth factor receptor (EGFR) monomers on tyrosine residues leading to EGFR transactivation. Tyrosine-phosphorylated EGFR forms complex with adapter proteins, including growth factor receptor binding protein 2-Sos, which activate Ras and the ERK pathway (27).
We think that these results will form the basis for further studies of this interesting gene, and the possible translation of the discovery of this molecule into potential use in cancer diagnosis and/or treatment.
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
We thank Dr. Timothy Lane for his assistance. J. Whitelegge wishes to thank the Pasarow and Keck foundations for mass spectrometry equipment funding.
| Footnotes |
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Received 11/ 9/04. Revised 5/ 6/05. Accepted 5/12/05.
| References |
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. Am J Path 1997;150:130714.[Abstract]
T3-1 cell line is mediated by protein kinase C, c-Src, and CDC42. Mol Endocrinol 1998;12:81524.This article has been cited by other articles:
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