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Priority Reports |
1 Children's Memorial Research Center and Robert H. Lurie Comprehensive Cancer Center at Northwestern University; 2 Department of Pathology, Loyola University of Chicago Medical Center, Chicago, Illinois; 3 Translational Genomics Research Institute, Phoenix, Arizona; 4 Dana-Farber Cancer Institute and Harvard Medical School; and 5 Center for Applied Cancer Science, Dana-Farber Cancer Institute, Boston, Massachusetts
Requests for reprints: Mary J.C. Hendrix, Children's Memorial Research Center, 2300 Children's Plaza, Box 222, Chicago, IL 60614. Phone: 773-755-6528; Fax: 773-755-6594; E-mail: mjchendrix{at}childrensmemorial.org.
| Abstract |
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| Introduction |
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To date, comparative global gene analyses of cutaneous melanoma have revealed that aggressive tumor cells express genes (and proteins) associated with multiple cellular phenotypes (6), coincident with a down-regulation of melanocyte-associated antigen genes (Melan-A and tyrosinase; refs. 7, 8). These intriguing findings support the premise that aggressive melanoma cells adopt a multipotent, plastic phenotype. One example of melanoma cell plasticity is vasculogenic mimicry, which characterizes the unique ability of aggressive melanoma cells, but not of poorly aggressive melanoma cells, to express endothelial-associated genes and form extracellular matrix (ECM)rich vasculogenic-like networks in three-dimensional culture (9). These ECM-rich networks, observed in aggressive tumors of patients with melanoma (10), have now been reported in other tumor types (for review, see ref. 11). The etiology of this important vascular phenotype remains unclear; however, it seems to involve dysregulation of the tumor-specific phenotype and the concomitant transdifferentiation of aggressive tumor cells into other cell types. Furthermore, melanoma cells, but not normal melanocytes, share vascular cellassociated markers with endothelial cells (12).
A better understanding of the molecular changes that occur during melanocytic progression to a melanoma phenotype is needed to develop accurate diagnostic markers at the earliest possible stages of transformation. To gain unique insights into this process, we developed a three-dimensional model that allows observations of the interactions of normal human melanocytes with a metastatic melanoma matrix to determine whether these normal cells could be reprogrammed by inductive cues in the tumor cell microenvironment. The data reveal the transdifferentiation of the normal melanocytic phenotype to that of an aggressive melanoma-like cell with commensurate increased migratory and invasive ability with no detectable genomic alterations, thus showing the epigenetic influence of the metastatic microenvironment. However, removal of the transdifferentiated melanocytes from this inductive microenvironment results in their reversion to a normal phenotype. This novel approach provides new insights into the epigenetic reprogramming of the benign melanocytic phenotype as it responds to metastatic environmental cues and, most importantly, identifies specific genes involved in the transdifferentiation of melanocytes to a more aggressive phenotype that may have therapeutic value.
| Materials and Methods |
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Three-dimensional preconditioned matrices. A critical aspect of this work was the production of defined three-dimensional matrices as outlined in Fig. 1. Twenty-five microliters of type I collagen (average 3 mg/mL; BD Bioscience) were dropped into 12-well culture dishes and polymerized with an application of 100% ethanol at room temperature. After extensive washing with PBS followed by medium, tumor cells or normal melanocytes were seeded onto the three-dimensional matrix in complete medium. The three-dimensional cultures were then observed after 3 to 4 days and images were captured digitally using a Zeiss model 25 inverted microscope (Carl Zeiss, Inc., Thornwood, NY) and Hitachi HV-C20 CCD camera (Hitachi Denshi America Ltd., Woodbury, NY). For experiments designed to analyze the transdifferential potential of normal melanocytes when placed on a matrix preconditioned by highly aggressive melanoma cells (C8161), the cells were removed after 3 to 4 days with 20 mmol/L NH4OH followed by thorough washes with water, PBS, and then complete medium.
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Microarray analysis and expression microarrays. Total RNA from C8161 melanoma cells, normal melanocytes cultured on a human collagen I three-dimensional matrix, and melanocytes cultured on matrix preconditioned by aggressive melanoma cells (each in duplicate) was isolated using TRIZOL reagent (Invitrogen) followed by a further purification through a RNeasy midi column (Qiagen, Valencia, CA). RNAs were labeled and fragmented using the One Cycle Target Labeling Kit (Affymetrix, Santa Clara, CA), hybridized to Affymetrix HG-U133A 2 arrays, washed, stained, and scanned on a GeneChip Scanner 3000 (Affymetrix) according to the recommendations of the manufacturer. Data were extracted using Affymetrix GCOS software and linearly scaled to a trimmed mean intensity of 1,000 units. Genes for which no sample had detectable expression (called "P" by GCOS) were excluded from subsequent analyses.6
Semiquantitative reverse transcription-PCR analysis. Total RNA from normal melanocytes cultured on a human collagen I three-dimensional matrix (nonconditioned) or a matrix preconditioned by aggressive melanoma cells was reverse transcribed and gene expression was determined using PCR as previously described (6).7
Quantitative real-time PCR analysis. Total RNA (2 µg) was reverse transcribed using the Advantage PCR kit in accordance with the instructions of the manufacturer (Clontech, Palo Alto, CA). Real-time PCR was done on a 7500 Real-time PCR System (Applied Biosystems, Foster City, CA) using TaqMan gene expression human primer/probe sets for the following genes:
3-integrin subunit (Hs00233722_ml), CD13 (Hs00174265_ml), c-met (Hs00179845_ml), EphA2 (Hs00171656_ml), keratin 7 (Hs00818825_ml), Ki-67 (Hs00606991_ml), laminin 5
2 chain (Hs00194345_ml), Melan-A (Hs00194133_ml), MITF (Hs00165156_ml), PAX8 (Hs00243335_ml), TIE-1 (Hs00175800_ml), and urokinase (Hs00170782_ml). cDNA (5 µL), 1.25 µL of 20x Gene Expression Assay Mix, and 12.5 µL of 2x TaqMan Universal PCR Master Mix were mixed and 20 µL were amplified with the following thermocycler protocol: 1 cycle at 50°C for 2 minutes, 1 cycle at 95°C for 10 minutes, and 40 cycles at 95°C for 15 seconds/60°C for 1 minute. Target gene expression was normalized to the endogenous control gene glyceraldehyde-3-phosphate dehydrogenase (GAPDH; 4333764F). Data were analyzed using Applied Biosystems Sequence Detections Software (version 1.2.3).
Array-based comparative genomic hybridization analysis. For array-based comparative genomic hybridization (array-CGH), genomic DNA was fragmented and random prime labeled as previously published (14). Labeled DNAs were hybridized to human oligonucleotides microarrays containing 22,500 elements designed for expression profiling (Agilent Technologies, Human 1A V2), for which 16,097 unique map positions were defined (National Center for Biotechnology Information, Build 35). The median interval between mapped elements is 54.8 kb; 96.7% of intervals of are <1 Mb and 99.5% are <3 Mb. Fluorescence ratios of scanned images were calculated as the average of two paired (dye swap), and copy number profile was generated based on a segmentation algorithm that uses permutation to determine the significance of change points in the raw data. The segmented CGH profile identifies statically significant transitions in copy number, and copy number value for each segment in the profile is assigned the median of the contained probes. CGH profiles from different samples were compared using the segmentation profiles containing only statistical significant copy number changes.8
| Results and Discussion |
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Altered phenotype of normal human melanocytes exposed to the microenvironment of metastatic cutaneous melanoma. The morphologic analyses of the melanoma cells and melanocytes are shown in a side-by-side comparison in Fig. 2. Aggressive C8161 human cutaneous metastatic melanoma cells form vasculogenic-like networks on a three-dimensional collagen I matrix (Fig. 2A) whereas low passage, normal human epidermal melanocytes (from several different primary cultures) grown for 4 days on a three-dimensional collagen I matrix form a homogeneous dense cellular sheet with no networks (Fig. 2B). When the normal melanocytes were seeded onto the three-dimensional matrices preconditioned by the C8161 metastatic melanoma cells, they acquired an altered phenotype manifested by the formation of vasculogenic-like networks (Fig. 2C), similar to those formed by the metastatic melanoma cells (Fig. 2A). By comparison, when normal melanocytes were seeded onto three-dimensional collagen I matrices preconditioned by poorly aggressive, genetically matched C81-61 human melanoma cells, neither the melanoma cells (Fig. 2D, inset) nor the melanocytes (Fig. 2D) showed a vasculogenic phenotype. These data indicate that the three-dimensional matrices preconditioned by the aggressive metastatic melanoma, but not by the poorly aggressive melanoma (derived from the same patient), exert an epigenetic effect on normal melanocytes, leading to their transdifferentiation to a phenotype resembling the aggressive melanoma cells. These observations are further supported by the molecular signature(s) of C8161 versus C81-61 melanoma cells showing the expression of multiple cellular phenotypes with augmented ECM remodeling capabilities by the aggressive C8161 cells, but not by the poorly aggressive C81-61 cells (6). Additional evidence showing an altered melanocyte phenotype is shown in Fig. 2E where the melanocytes cultured on the metastatic C8161 melanomapreconditioned matrix were 2.2-fold more migratory and 3.6-fold more invasive than melanocytes cultured on a control three-dimensional collagen I matrix. (Similar results were achieved with other melanocyte cultures exposed to the metastatic microenvironment, as shown in the Supplementary data).
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2 chain and an associated receptor,
3-integrin subunit; urokinase and Ki-67]; melanocyte pathwayassociated genes [MITF (a basic/helix-loop-helix/leucine-zipper transcription factor), Melan-A, and tyrosinase]. These data indicate that the normal melanocytes exposed to a metastatic melanoma matrix for 4 days were reprogrammed to express genes associated with a multipotent, plastic phenotype similar to the aggressive C8161 melanoma cells. Specifically, the melanocytes up-regulated genes associated with (a) a transdifferentiated phenotype (EphA2, VE-cadherin, TIE-1, VEGF-C, PAX8, kerain 7, and CD13) and (b) an ECM remodeling, migratory, and invasive phenotype (laminin 5
2 chain, urokinase,
3-integrin subunit, and c-met). However, there were two notable exceptions pertinent to the confirmed genes tested. The first exception is that the melanocytes did not acquire the Ki-67 proliferation marker, which is strongly expressed by the metastatic melanoma cells. Another important exception is that the melanocytes did not lose their characteristic expression of pigmentation pathwayassociated genes (MITF, Melan-A, and tyrosinase). MITF is a melanoma-specific transcription factor that regulates the expression of the melanoma antigen recognized by T cells 1 (MART1) gene encoding Melan-A (8) and tyrosinase is a critical enzyme in the melanin biosynthesis pathway (16). Previous reports have shown the favorable disease outcome in melanoma patients in whom these differentiation melanocyte-associated antigen genes are expressed (7). Thus, it is tempting to speculate that efforts to reexpress these genes in patients with metastatic disease could serve as a viable strategy for redifferentiating a highly aggressive, plastic, melanoma tumor cell phenotype to a melanocytic phenotype. Our data suggest that the melanocyte phenotype is maintained at least through the initial stage of epigenetic transition. However, the robust induction of c-Met expressionassociated with the augmented invasive and metastatic potential (17, 18)in the benign melanocytes exposed to metastatic melanoma microenvironments strongly indicates that these cells are acquiring invasive properties as further shown by their increased invasive and migratory ability. The Supplementary data showing the RT-PCR analysis (A) and confirmation of select genes using an additional normal human melanocyte cell culture exposed to a C8161-preconditioned matrix, as well as the migration and invasion data (B), are generally overlapping with the data presented in Figs. 2 and 4. However, it is important to note that the melanocytes exposed to the melanoma matrix for 4 days (Fig. 4A) show a more robust gene expression than the melanocytes exposed to a similar matrix for only 3 days (Supplementary data A), thus illustrating a direct correlation between the time of exposure and epigenetic induction by the microenvironment. To determine the stability and longevity of the epigenetic induction of the transdifferentiated melanocytes, the cells were removed from the metastatic melanomapreconditioned matrices and cultured on tissue culture plastic for 7, 14, and 21 days, respectively. As shown in Table 1, the expression of key genes associated with an aggressive melanoma phenotype is remarkably reduced by 7 days and almost undetectable by 21 days, indicating that the epigenetic effect is transient in nature. Thus, removal of the melanocytes from the inductive metastatic melanoma matrix results in a reversion to their normal phenotype. Another noteworthy observation presented in the Supplementary data (C) is the RT-PCR analysis of C8161 cells exposed to three-dimensional collagen I matrices preconditioned by two independent cultures of normal human melanocytes showing no change in the expression of genes tested. These data indicate that a benign melanocyte microenvironment does not epigenetically influence metastatic melanoma cells to change their plastic, molecular phenotype.
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Transdifferentiation is emerging as an important phenomenon that adds a new level of complexity to developing rational therapeutic strategies (11, 19). Pertinent to this theme and our work is the observation that during the development of Kaposi's sarcoma, endothelial cells transdifferentiate into tumor cells (20) whereas aggressive melanoma cells and melanocytes exposed to a metastatic melanoma matrix transdifferentiate to form endothelial-like networks known as vasculogenic mimicry. Our current study used a novel experimental approach that revealed an epigenetic induction of a transdifferentiated phenotype in normal melanocytes exposed to a microenvironment of metastatic cutaneous melanoma cells. The three-dimensional microenvironment model presented here may serve as a viable tool to address essential signaling pathways and epigenetic mechanisms critical to melanocytic transformation to melanoma. These findings offer new insights into microenvironmental influence on cellular differentiation and plasticity, as well as mechanisms that could be targeted for novel therapeutic strategies in preventing melanocytic neoplasia.
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
| Footnotes |
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6 Further details about data analysis are available at http://www.tgen.com. ![]()
7 Primers, annealing temperatures, and number of amplification cycles for each gene that was evaluated are listed at http://www.childrensmrc.org/hendrix/supplemental/. ![]()
8 Array-CGH profiles were done at the Center for Applied Cancer Science at Dana-Farber Cancer Institute. ![]()
9 The complete global gene analysis is available at http://www.tgen.com. ![]()
Received 7/20/05. Revised 9/16/05. Accepted 9/22/05.
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