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Cell and Tumor Biology |
Np63
in Squamous Epithelium
Departments of 1 Biochemistry, 2 Pathology, and 3 Biostatistics and 4 Center in Molecular Toxicology, the Vanderbilt-Ingram Cancer Center, Vanderbilt University School of Medicine, Nashville, Tennessee
Requests for reprints: Jennifer A. Pietenpol, 652 Preston Research Building, Vanderbilt University Medical Center, Nashville, TN 37232. Phone: 615-936-1512; Fax: 615-936-1790; E-mail: j.pietenpol{at}vanderbilt.edu.
| Abstract |
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Np63
is a nuclear transcription factor that maintains epithelial progenitor cell populations, is overexpressed in several epithelial cancers, and can negatively regulate apoptosis. However, the mechanisms by which
Np63
promotes cell survival are unclear.
Np63
has been reported to act as a transcriptional repressor, but specific target genes directly repressed by
Np63
remain unidentified. Here, we present evidence that
Np63
functions to negatively regulate the proapoptotic protein IGFBP-3. Disruption of p63 expression in squamous epithelial cells increases IGFBP-3 expression, whereas ectopic expression of
Np63
down-regulates IGFBP-3.
Np63
binds to sites in the IGFBP-3 gene in vivo and can modulate transcription through these sites. Furthermore,
Np63
and IGFBP-3 expression patterns are inversely correlated in normal squamous epithelium and squamous cell carcinomas. These data suggest that IGFBP-3 is a target of transcriptional repression by
Np63
and that this repression represents a mechanism by which tumors that overexpress p63 may be protected from apoptosis.
Key Words: p53 squamous carcinoma repression
| Introduction |
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60% identity) to that of p53. Consistent with this sequence conservation, p63 proteins can bind to p53-consensus DNA sequences in vitro and in vivo (6, 7). Isoforms of p63 have different NH2 termini with either transactivating (TA) or dominant negative (
N) activities; however, in epithelial cells,
Np63
is the predominant form expressed (6, 811). The
Np63
protein has been reported to act as a transcriptional repressor in vitro and in animal models and can strongly oppose p53- or TAp63-mediated transactivation (1, 6, 12, 13).
Np63
is expressed primarily in the proliferative, basal compartment of epithelia, including epidermis, oral mucosa, cervix, vaginal epithelium, urothelium, prostate, and breast (1, 8, 9). Expression of
Np63
decreases in differentiating cells in vitro and in vivo, and studies suggest that
Np63
is specifically expressed in epidermal stem cells possessing the highest proliferative capacity (6, 14, 15).
Further insight to
Np63
function is provided by animal models in which p63 expression is disrupted. Unlike p53 / mice, which are developmentally normal but rapidly develop tumors (16), p63 / mice display gross developmental abnormalities. The most striking of these is a complete lack of all stratified squamous epithelia and their derivatives, including epidermis, mammary glands, prostate, and other tissues (17, 18). This phenotype is recapitulated in zebrafish, in which disruption of
Np63 results in lack of epidermal morphogenesis (12, 13). Taken together, these data suggest that p63 is critical for the survival or proliferative capacity of epithelial stem cells.
Np63
is overexpressed in several epithelial cancers, often as a result of gene amplification (2, 1922). Overexpression of a
Np63 isoform in Rat-1A cells increases colony growth in soft agar and xenograft tumor formation in nude mice, supporting the view that p63 acts as an oncogene (19). In addition,
Np63
must be down-regulated in order for UVB-induced apoptosis to occur (23). It is hypothesized that
Np63
promotes the survival and maintenance of proliferative capacity of both epithelial stem cells and cancer cells. However, the mechanisms by which
Np63
promotes cell survival, in particular which target genes are regulated by
Np63
, remain to be elucidated.
Here, we present evidence that
Np63
functions to negatively regulate insulin-like growth factor binding protein 3 (IGFBP-3) at the transcriptional level. IGFBP-3 induces apoptosis in a number of cell types, and its expression inhibits the growth of xenograft tumors (2428). IGFBP-3 was identified as a target gene of the tumor suppressor p53 almost 10 years ago (29); however, the role of IGFBP-3 in p53-mediated apoptosis remains unclear. In contrast, subsequently identified proapoptotic p53 target genes such as Noxa and PUMA have been shown to play unequivocal roles in p53-mediated apoptosis (3032). Regulation of IGFBP-3 expression by p63 may provide a stronger link between IGFBP-3mediated apoptosis and the p53 family of transcription factors. The data presented herein suggest that IGFBP-3 is a target of transcriptional repression by
Np63
and that this repression represents a mechanism by which tumors that overexpress p63 may be protected from apoptosis.
| Materials and Methods |
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Cell Transfection and Small Interfering RNA. The following targeting sequence was used for small-interfering siRNAmediated knockdown of p63: (5'-AACAGCCATGCCCAGTATGTA-3'). Targeting oligonucleotides for p63 were designed as previously described (33). pCEP-H1
and pCEP-H1 p63 expression vectors were generated as previously described (34).
Np63
was ectopically expressed in A-549 cells using pCEP4-
Np63
as previously described (6). HaCaT, SCC-1, SCC-6, SCC-012, and A-549 cells were transfected using Fugene 6 (Roche, Indianapolis, IN). Cells were selected with hygromycin B 48 hours after transfection and harvested for Western or Northern analysis as described below.
Flow Cytometry. Cells were trypsinized, and 1 x 106 cells were analyzed by flow cytometry. Cells were incubated with 50 µg/mL propidium iodide (Sigma, St. Louis, MO), and DNA content was measured using a FACSCalibur (Becton Dickinson, Palo Alto, CA). Data were analyzed using Cell Quest software (Becton Dickinson); 15,000 events were analyzed for each sample.
Western Analysis. Cells were harvested and lysates prepared as previously described (35). Western analysis was done as previously described (35) with the following primary antibodies:
-p63 monoclonal antibody Ab-1 (Oncogene Research Products, Calbiochem, San Diego, CA),
-ß-actin polyclonal antibody I-19 (Santa Cruz Biotechnology, Santa Cruz, CA),
-poly(ADP-ribose) polymerase polyclonal antibody (Cell Signaling, Beverly, MA), and
-IGFBP-3 goat polyclonal antibody (Diagnostic Systems Laboratories, Webster, TX). A Fluor-S Max MultiImager (Bio-Rad, Hercules, CA) was used to quantify Western signals.
Luciferase Assays. Upper and lower strand oligonucleotides representing IGFBP-3 Box A and Box B binding sites, as well as analogous sites with key mutations (Mut-Box A and Mut-Box B) as previously described (29), were used for construction of luciferase reporter plasmids. Oligonucleotide sequences are available upon request. Complementary oligonucleotides were annealed, and four copies of each binding site were concatamerized and cloned into the SmaI site of pGL3promoter. H1299 cells were transiently transfected with the pGL3promoter-Box A, -Box B, -MutBox A, and -MutBox B reporter plasmids and expression vectors encoding p53,
Np63
, and TAp63
. The TAp63
cDNA was kindly provided by Dr. Chikashi Ishioka (Department of Clinical Oncology, Tokohu University, Japan). All transfections were done using Fugene 6, and cells were harvested 30 hours after transfection. Luciferase activity measurements were done using the Dual-Luciferase Reporter Assay System (Promega, Madison, WI).
Chromatin Immunoprecipitation Assay. Cross-linking and harvesting of HaCaT and SCC-1 cells was done as previously described (6). The lysates were divided into aliquots, and 1 mg of protein extract was immunoprecipitated with
-p63 rabbit polyclonal antibody (H129; Santa Cruz) or
-Bax rabbit polyclonal antibody (N20; Santa Cruz) as previously described (6). IGFBP-3 Box A, Box B, and Exon 1, and p21 site 2 PCR amplifications were done and PCR DNA products were resolved using 6% polyacrylamide gels (acrylamide-bisacrylamide [19:1]) in 1x Tris acetate-EDTA buffer. Primer sequences and PCR conditions are available upon request. Gels were stained with ethidium bromide.
Tissue Collection and Immunohistochemistry. Tissue samples were taken from individuals treated at Vanderbilt University Medical Center with institutional review board approval. Paraffin-embedded samples used for analysis were all evaluated by the study pathologist, Dr. Ely. Sections of 5-µm-thick paraffin-embedded tissue microarrays were deparaffinized and rehydrated with xylene and ethanol. For p63 immunostaining, antigen retrieval was done by microwaving slides in 0.1 mol/L citrate buffer for 10 minutes. Slides were incubated 10 minutes in 3% hydrogen peroxide in methanol to exhaust endogenous peroxidase activity then incubated with a 1:50 dilution of p63 Ab-1 for 1 hour at 25°C. The Dako (Carpinteria, CA) LSAB2 kit was used to develop the slides. For IGFBP-3 staining, slides were incubated 10 minutes in 3% hydrogen peroxide then blocked for 20 minutes with 2.5% goat serum. Slides were incubated with IGFBP-3 rabbit polyclonal antibody (Diagnostic Systems Laboratories) overnight in a 1:100 dilution at 4°C. Biotin-labeled anti-rabbit secondary antibody was applied for 30 minutes, then slides were incubated for 30 minutes with VECTASTAIN Elite ABC reagent. The DAB substrate kit for peroxidase (Vector Laboratories, Burlingame, CA) was used to develop slides. The slides were counterstained with hematoxylin. Protein expression was determined and scored by the study pathologist. Statistical significance of the relationship between p63 and IGFBP-3 expression was determined using Fisher's exact test.
| Results |
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Np63
expression is required for UV radiationinduced apoptosis in mouse epidermis (23). To determine if loss of
Np63
expression would sensitize squamous cell lines to apoptosis in vitro, we disrupted p63 expression in SCC-1 cells using siRNA, and examined sensitivity to apoptosis-inducing agents. siRNA-mediated knockdown of p63 led to an approximate 2-fold increase in apoptosis as measured by poly(ADP-ribose) polymerase cleavage and subdiploid cells (Fig. 1A and B). This effect was p63 dependent, because H1299 cells, which do not express endogenous
Np63
, did not show a significant increase in apoptosis when transfected with p63-specific siRNA (Fig. 1A and B). These data confirm previous observations that
Np63
plays a role in regulation of apoptosis in squamous epithelial cells.
|
Np63
that could affect apoptosis, we disrupted p63 expression in SCC-1 cells using siRNA and evaluated global gene expression using the Affymetrix (Santa Clara, CA) U133A GeneChip (data not shown). IGFBP-3 expression was increased
2.5-fold following siRNA-mediated knockdown of p63 expression. With respect to p53 target genes, this effect was specific for IGFBP-3, as we did not observe changes in the expression of other target genes such as p21, Mdm2, Bax, Noxa, and PUMA. To validate these microarray results, we examined IGFBP-3 protein expression in a panel of transformed (SCC-1, SCC-012, SCC-6) and nontransformed (HaCaT) squamous cell lines in which p63 expression had been disrupted.
Np63
is the predominant, if not only, p63 protein expressed in these cell lines (ref. 36 and data not shown). siRNA-mediated knockdown of p63 expression led to an increase in IGFBP-3 protein levels in all cell lines examined (Fig. 2A). The IGFBP-3 protein was up-regulated
2- to 3-fold by disruption of p63 expression (Fig. 2B), consistent with increases in IGFBP-3 mRNA seen in microarray analyses. IGFBP-3 protein levels were also increased in the conditioned media of HaCaT and SCC-1 cells in which p63 expression had been disrupted, indicating an increase in secreted IGFBP-3 protein as well (Fig. 2C). To confirm that this up-regulation of IGFBP-3 was due specifically to siRNA-mediated disruption of p63, we transfected A-549 cells, which do not express detectable p63, with p63-targeting siRNAs. We did not observe any change in IGFBP-3 levels (Fig. 2D), suggesting that the up-regulation of IGFBP-3 is not due to an off-target effect of the siRNA. Furthermore, transfection of HaCaT cells with a control siRNA targeting GFP did not affect IGFBP-3 protein levels (Fig. 2E). Northern analyses showed changes in IGFBP-3 mRNA levels consistent with protein levels in all cell lines (data not shown). We conclude from these data that disruption of endogenous p63 expression leads to up-regulation of IGFBP-3 at both the mRNA and protein level.
|
Np63
in cells that do not express endogenous p63 could negatively regulate IGFBP-3 expression, we transfected A-549 cells with
Np63
. Ectopic expression of
Np63
decreased expression of IGFBP-3 (Fig. 2F). These results show that
Np63
negatively regulates IGFBP-3 expression in both transformed and nontransformed cell lines. Furthermore, all cell lines used lack functional p53; therefore, the observed
Np63
-mediated effects on IGFBP-3 expression are p53 independent.
p63 Is Bound to Specific Sequences in the IGFBP-3 Gene In vivo. The DNA-binding domain of
Np63
has significant homology to that of p53, and numerous studies have reported that p63 proteins can bind to p53 consensus DNA sequences (6, 7, 37, 38). To further investigate the mechanism by which
Np63
can negatively regulate expression of IGFBP-3, we examined sequences in the IGFBP-3 gene that have previously been identified as p53 binding sites (29). These sites, named Box A and Box B, are located in the second and third intron of the IGFBP-3 gene, respectively (Fig. 3A). The sequences of Box A and Box B and the p53 consensus are shown in Fig. 3B. To determine if p63 protein is bound to Box A and Box B sites in vivo, we used chromatin immunoprecipitation assays (39). In HaCaT and SCC-1 cells, IGFBP-3 Box A and Box B DNA were bound to immunopurified p63 protein at levels significantly higher than nonspecific background (Fig. 3C). p63 has been previously reported to bind to both p53-consensus sites in the p21 promoter (6, 7); thus, p21 site 2 was used as a positive control in this assay. There was little, if any, binding of p63 to exon 1 of IGFBP-3, demonstrating that p63 binding is specific to Box A and Box B in this genomic region. Collectively, these data show that
Np63
is bound to the Box A and Box B sites in the IGFBP-3 gene in transformed and nontransformed squamous cell lines.
|
Np63
could affect transcription through its binding to the IGFBP-3 Box A and Box B sites, we used luciferase reporter plasmids containing the wild-type Box A and Box B sites as well as the mutant sites Mut-Box A and Mut-Box B. For these assays we used TAp63
, as it has an identical DNA-binding domain to that of
Np63
, but strongly activates transcription, providing a facile readout of p63 regulation of transcription through the Box A and Box B sites. Consistent with our in vivo DNA-binding data, p53 and TAp63
were able to activate transcription through the Box A and Box B sites, but not the Mut-Box A and Mut-Box B sites (Fig. 4A). TAp63
activated transcription from both sites
4- to 5-fold, whereas p53-mediated transactivation was comparable, activating 5- to 6-fold (Fig. 4A). H1299 do not express endogenous IGFBP-3, therefore we were unable to determine if TAp63
expression was able to induce endogenous IGFBP-3 in these cells (data not shown).
Np63
effectively inhibited both p53- and TAp63
-mediated transactivation through both Box A and Box B sites, reducing luciferase activity encoded by the reporter constructs by 89% to 100% (Fig. 4B). These data are consistent with the observed
Np63
-mediated regulation of IGFBP-3 expression in Fig. 2.
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Np63
and IGFBP-3 Protein Expression Patterns Are Inversely Correlated in Normal Epithelium and Squamous Cell Carcinomas In vivo. To determine if the regulation of IGFBP-3 expression by
Np63
observed in squamous epithelial cell lines was seen in vivo, we examined p63 and IGFBP-3 protein expression in tissue sections of normal oral epithelium and squamous cell carcinomas of the head and neck. As previously reported, p63 protein expression is restricted to the basal region of normal epithelium (Fig. 5A; refs. 1, 8, 9 ). In contrast, IGFBP-3 protein was expressed primarily in the differentiating suprabasal cells of the epithelium (Fig. 5A). We further examined this phenomenon in human tumors using a tissue microarray consisting of tissue from 49 patients with squamous cell carcinomas of the head and neck. Consistent with previous reports, we found that 67% (33 of 49) of squamous cell carcinomas of the head and neck overexpressed p63 (19, 40; representative staining patterns are seen in Fig. 5B, top two panels). Of these p63-overexpressing tumors, only 12% (4 of 33) were positive for IGFBP-3 expression (Fig. 5B, top, left). Conversely, 50% of tumors that do not overexpress p63 express IGFBP-3 (Fig. 5B, bottom, left). Of note, in select tumors positive for both p63 overexpression and IGFBP-3 expression, it was difficult to determine if IGFBP-3 expression was localized to the stroma or tumor epithelium (Fig. 5B, top, left); however, this did not impact the scoring. Fisher's exact test indicates a significant negative relationship between p63 and IGFBP-3 expression (P = 0.01). We conclude from these data that p63 and IGFBP-3 expression patterns are inversely correlated in normal and transformed squamous epithelium. This is consistent with our model that
Np63
negatively regulates the expression of IGFBP-3.
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| Discussion |
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Np63
is the predominant isotype of p63 expressed in normal and transformed squamous epithelium. The
Np63
protein is overexpressed in several epithelial cancers, often as a result of genomic amplification, and numerous studies have highlighted the oncogenic potential of this protein (19, 21, 22, 4043). Furthermore, animal models indicate that
Np63 is critical for the maintenance of progenitor cells in stratified epithelium (12, 13, 17, 18), and
Np63
has been observed to negatively regulate apoptosis in vivo (23). However, the mechanisms by which
Np63
executes these functions, particularly which target genes are directly regulated by p63, are poorly defined. A microarray screen has identified a large number of potentially regulated genes, including IGFBP-3, using ectopically overexpressed p63 proteins in a nonepithelial cell line (44). Here, we present evidence that IGFBP-3 is a direct transcriptional target of negative regulation by endogenous
Np63
in squamous epithelial cells and tissues. siRNA-mediated knockdown of p63 expression in human keratinocytes and squamous carcinoma cells resulted in an up-regulation of IGFBP-3 at the mRNA and protein levels; conversely, introduction of
Np63
into a cell line lacking any p63 expression reduced IGFBP-3 expression.
Np63
was observed to bind to sites in the IGFBP-3 gene in vivo, and could modulate transcription through these sites. Finally, observations about the relationship between
Np63
and IGFBP-3 in cell culture models were extended to normal and transformed human tissues, in which expression patterns of p63 and IGFBP-3 showed significant negative correlation.
IGFBP-3 is a growth-inhibitory, proapoptotic protein in both cell culture and animal models. Two mechanisms mediate its proapoptotic effects: an IGF-dependent mechanism and an IGF-independent mechanism (reviewed in ref. 45). The apoptotic effects of IGFBP-3 in cell culture and animal models are clinically significant as well; decreased IGFBP-3 expression is correlated with unfavorable prognosis in human cancers (46, 47). Additional studies are necessary to determine whether negative regulation of IGFBP-3 by
Np63
has prognostic significance in head and neck squamous cell carcinomas and other p63-overexpressing cancers.
Np63
can bind to p53 consensus DNA binding sites and act as a transcriptional repressor in vitro and in vivo (6, 7, 13). Numerous studies have reported that
Np63
acts as a dominant negative with respect to p53 function (1, 6, 12, 48). Despite these observations, there is a remarkable paucity of data demonstrating the ability of
Np63
to negatively regulate specific p53 target genes in intact cells or animal models (38, 44). In fact, paradoxical transactivation of p53 target genes by ectopically expressed
Np63
has been reported (44, 49). Significantly, several studies reporting the repressive effects of
Np63
have used the approach of disrupting endogenous p63 expression rather than relying solely on ectopic overexpression of p63 proteins (12, 13, 38). This implies that ectopic
Np63
may not be able to function in the same manner as endogenous protein. This idea is supported by inconsistent data concerning the activity of
Np63
in luciferase reporter assays (50), and a recent report suggests that investigators should use caution in interpreting data from such assays due to the complexity of the p53 family of transcription factors (51). Continued research into the biological and biochemical functions of
Np63
will be necessary to resolve these questions.
It is clear from mouse and zebrafish models that the major biological role of p63 is the maintenance of stratified epithelia (12, 13, 17, 18) . Several lines of evidence suggest that
Np63
is a nuclear transcription factor that executes this function by acting as a transcriptional repressor (6, 13). It stands to reason that the identification of the specific target genes repressed by
Np63
will greatly enhance our understanding of the mechanisms by which p63 promotes the viability and proliferative capacity of epithelial cells. In this study, we present evidence that the proapoptotic IGFBP-3 is one such target. Without question, the continued identification of target genes regulated by p63 will further elucidate signaling pathways involved in maintenance of stratified epithelium, and provide insight to the interaction of the p53 family of transcription factors.
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
We thank Drs. Anna Spagnoli (Vanderbilt University Medical Center) for kindly providing IGFBP-3 cDNA, David Sidransky (Johns Hopkins), Petra Boukamp (German Cancer Research Center-DKFZ, Heidelberg, Germany), and Tom Carey (University of Michigan) for providing cell lines. We thank members of the Pietenpol and Cortez laboratories for critical reading of the manuscript and helpful discussions.
Received 9/26/04. Revised 1/ 5/05. Accepted 1/12/05.
| References |
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Np63
phosphoprotein binds the p21 and 14-3-3s promoters in vivo and has transcriptional repressor activity that is reduced by Hay-Wells syndrome-derived mutations. Mol Cell Biol 2003;23:226476.
and
Np63
in benign and malignant oral epithelial lesions. Int J Cancer 2000;87:36872.[CrossRef][Medline]
Np63 is a direct target of Bmp signaling and encodes a transcriptional repressor blocking neural specification in the ventral ectoderm. Dev Cell 2002;2:61727.[CrossRef][Medline]
Np63
expression is regulated by the phosphoinositide 3-kinase pathway. J Biol Chem 2003;278:5140814.
) and selective dominant-negative activity of p73L (
Np63
) toward p53-responsive promoter activities. Biochem Biophys Res Commun 2001;286:62834.[CrossRef][Medline]
N-p63 promoter activity by p53 and
N-p63-
contributes to differential regulation of p53 target genes. Oncogene 2003;22:760716.[CrossRef][Medline]
Np63 into a protein degradation pathway. Proc Natl Acad Sci U S A 2001;98:181722.
Np63 induces ß-catenin nuclear accumulation and signaling. Cancer Cell 2002;1:36979.[CrossRef][Medline]
Np63
and TAp63
Regulate transcription of genes with distinct biological functions in cancer and development. Cancer Res 2003;63:23517.
Np63a can induce cell cycle arrest and apoptosis and differentially regulate p53 target genes. Oncogene 2001;20:3193205.[CrossRef][Medline]
functions as both a positive and a negative transcriptional regulator and blocks in vitro differentiation of murine keratinocytes. Oncogene 2003;22:363544.[CrossRef][Medline]
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