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Molecular Biology, Pathobiology, and Genetics |
Departments of 1 Genetics and Tumor Cell Biology and 2 Developmental Neurobiology and 3 Animal Resource Center, St Jude Children's Research Hospital, Memphis, Tennessee
Requests for reprints: Peter J. McKinnon, Department of Genetics, St Jude Children's Hospital, 332 North Lauderdale, Memphis, TN 38105. Phone: 901-495-2700; Fax: 901-526-2907; E-mail: peter.mckinnon{at}stjude.org.
| Abstract |
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| Introduction |
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Our previous studies examining the genesis of medulloblastoma identified a common cohort of gene expression changes that occurred in genetically distinct mouse models of medulloblastoma (15, 16). In these mouse models, tumors occurred because of defects in either DNA repair, SHH signaling, or cell cycle regulation. One gene that was highly expressed in all mouse medulloblastomas studied was Ptch2. Furthermore, >30% of human medulloblastomas showed increased expression of PATCHED2 (PTC2); this group of human patients was associated with poor prognosis (15). Many features of PTCH2 make this a gene of interest and potentially relevant to tumorigenesis. These include the high similarity to PTCH1, the sites of expression, and the link to other tumor types (1722).
PTC2 is located on chromosome 1p33-34, comprises 22 exons, and shares about 73% amino acid similarity to PTC1 although with significant sequence differences in the transmembrane domains 6 and 7. Several alternatively spliced transcripts of the PTC2 gene have been identified in various human tissues, although the physiologic roles of PTC2 spliced forms remains to be determined (18, 22). Notably, PTC2 has been linked to familial/sporadic BCC and medulloblastoma (19, 22), tumors that are also associated with PTC1 mutation (8, 14). PTC2 was also suggested as a putative tumor suppressor candidate whose loss was observed frequently in meningioma (20, 21), and decreased PTC2 expression was associated with malignant peripheral nerve sheath tumors (17).
Like PTCH1, PTCH2 is also a SHH target, although as the expression pattern of PTCH1 and PTCH2 do not fully overlap, it is likely there are also separate functions for each (2326). PTCH2 can bind HH proteins and can form a complex with SMOOTHENED (26). Although the physiologic function of PTC2 is still unclear, based on sequence and biochemical similarity to PTC1 and aberrant expression in several tumors, it is possible that PTC2 is also important in the SHH signaling pathway and can modulate development and tumor formation. Therefore, to test if PTCH2 has functional overlap with PTCH1, including a role during tumorigenesis, we generated Ptch2-deficient mice. In contrast to Ptch1/ mice, which showed early embryonic lethality, Ptch2/ animals did not show any discernable abnormalities during development or a propensity for tumorigenesis. However, when combined with Ptch1 mutations, Ptch2 mutations promoted a dramatic increase in the incidence of tumorigenesis, suggesting a cooperative role of Ptch2 with the tumor suppressor function of Ptch1. Thus, to our knowledge, these data are the first demonstration that whereas Ptch2 is dispensable for development, it can influence the effect of Ptch1 attenuation during tumorigenesis.
| Materials and Methods |
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To examine the targeted Ptch2 allele, total RNA was extracted from P5 wild-type (WT) and Ptch2/ brains using Trizol (Invitrogen), and RNA was separated on a 1% agarose gel in a MOPS/formaldehydecontaining buffer. cDNA probes for either Ptch1 or Ptch2 were radiolabeled using a random primed labeling system (Roche, Indianapolis, IN).
Mice. Ptch1 and Ptch2 double mutant animals were obtained by intercrossing of Ptch1+/Ptch2/ or Ptch1+/Ptch2+/. The details of Ptch1 animal model were described before (13, 14). Ptch2/p53/ mutant animals were generated by intercrossing of either Ptch2+/p53+/ or Ptch2/p53+/ mice. All Ptch1-Ptch2 mice used in these studies were F2 or later-generation littermates on a 129Svj x C57BL/6 genetic background. The presence of a vaginal plug was designated as embryonic day 0.5 (E0.5), and the day of birth as postnatal day 0 (P0). Animals were acclimated to controlled temperature and constant light/dark schedule with food and water ad libitum. Full necropsy was done by the diagnostic Pathology laboratory at St. Jude Children's Research Hospital. All animals were housed in an Association for Assessment and Accreditation of Laboratory Animal Careaccredited facility and were maintained in accordance with the NIH Guide for the Care and Use of Laboratory Animals. The Institutional Animal Care and Use Committee at St. Jude Children's Research Hospital approved all procedures for animal use.
Histology, immunohistochemistry, and in situ hybridization. For tissue fixation, embryos at E13.5 were submersed directly in buffered 4% paraformaldehyde, and brains from P5 and 3-week-old animals were removed after trans-cardial perfusion with 4% buffered paraformaldehyde. Fixed tissues were then cryoprotected in 25% sucrose in PBS and subjected to immunohistochemistry. Tumors were extracted from euthanized animals and fixed immediately in 10% neutral buffered formalin. The following antibodies were used for immunohistochemistry: anti-Ki67 (1:1,000; Novocastra Laboratory, Newcastle upon Tyne, United Kingdom), anti-ß-tubulin II (Tuj1; 1:1,000; BabCo, Richmond, CA), glial fibrillary acidic protein (GFAP; 1:400; Sigma, St. Louis, MO), p27 (1:2,000; Santa Cruz Biotechnology, Santa Cruz, CA), and synaptophysin (1:200; Chemicon International, Temecula, CA). Antigen retrieval was used for all immunohistochemistry. Cryosections (10-µm thick) or paraffin sections (7-µm thick) were incubated with antibodies overnight at room temperature after quenching endogenous peroxidase. Immunoreactivity was visualized with the vasoactive intestinal peptide substrate kit (Vector Laboratories, Burlingame, CA) according the manufacturer's guide, or indocarbocyanine (Cy-3) conjugated secondary antibodies (Jackson ImmunoResearch Lab, West Grove, PA). For colorimetric detection, counterstaining with methyl green was done followed by mounting slides with DPX (BDH Laboratory, Poole, United Kingdom), and Gel/Mount (Biomedia Corp., Foster City, CA) was used for fluorescence analysis. H&E staining was done by routine methods. Terminal deoxynucleotidyl transferasemediated nick-end labeling assays were done using ApopTag (Fluorescein In situ Apoptosis Detection kit, Chemicon International) to detect neuronal apoptosis in the developing brain 6 hours after irradiation (18 Gy at 403 rad/min from a cesium irradiator). In situ hybridization was applied to detect Ptch1 and Ptch2 mRNA signals via exposure of emulsion-dipped slides in wild-type E16.5 and P7 brains and Ptch2, Gli1, Gli2, and secreted frizzled related protein 1 (Sfrp1) mRNA signals in Ptch1 and Ptch2 mutant medulloblastomas as described before (15) with support from GENSAT at St. Jude Children's Research Hospital (in situ methodology: http://www.stjudebgem.org/web/html/methods.php). Sense and antisense in situ hybridization probes were generated from a Ptch2 IMAGE clone (clone 3972649, nucleotides 1891-3568, and 3' untranslated region), a Gli1 clone in pSPORT1 (nucleotides 701-1251, Genbank accession no. AB025922), a Gli2 clone in pSPORT1 (nucleotides 1055-1835, Genbank accession no. X136212), and an Sfrp1 clone in pSPORT1 (nucleotides 247-1375, Genbank accession no. U88566).
Quantitative real-time PCR. Total RNA samples were extracted from snap-frozen tumor samples and control tissues using Trizol (Invitrogen). real-time reverse transcriptase-PCR (RT-PCR) was done as described before (15). A primer/Taqman probe set for Ptch2 was forward primer Ptch2-SDS-F (5'-ATCCTAGCTGGGAGCCTGAAG), reverse primer Ptch2-SDS-R (5'-TCCCGCATCCCAGAGAGA), and Taqman probe Ptch2-SDS-FAM (5'-TCCACTCTGGCTTCGTGCTTACTTCCA), which detected a portion of a missing part in the Ptch2 mutant allele (nucleotides 2366-2447, Genbank accession no. NM_008958). Two different sets of primer/Taqman probe sets for Ptch1 were used: one set to detect mRNA from exon 21 and the other for exon 2 (the exon disrupted in the mutant allele of Ptch1; ref. 14). To detect Ptch1 exon 21, we used forward primer Ptch1-SDS-F (5'-CAAGTGTCGTCCGGTTTGC), reverse primer Ptch1-SDS-R (5'-CTGTACTCCGAGTCGGAGGAA), and Taqman probe Ptch1-SDS-FAM (5'-CCTCCTGGTCACACGAACAATGGGTC). The primer set for Ptch1 exon 2 was forward primer Ptch1ex2-SDS-F (5'-GGCTACTGGCCGGAAAGC), reverse primer Ptch1ex2-SDS-R (5'-GAATGTAACAACCCAGTTTAAATAAGAGTCT), and Taqman probe Ptch1ex2-SDS-F (5'-CCGCTGTGGCTGAGAGCGAAGTTTC). In addition, we used the following primer/probe sets for other genes: Gli1 forward (5'-GCTTGGATGAAGGACCTTGTG), reverse (5'-GCTGATCCAGCCTAAGGTTCTC), and Taqman probe (5'-CCGGACTCTCCACGCTTCGCC); Sfrp1 forward (5'-TCCTCCATGCGACAACGA), reverse (5'-TGATTTTCATCCTCAGTGCAAACT), and Taqman probe (5' TGAAGTCAGAGGCCATCATTGAACATCTCTG); Math1 forward (5'-ATGCACGGGCTGAACCA), reverse (5'-TCGTTGTTGAAGGACGGGATA), and Taqman probe (5'-CCTTCGACCAGCTGCGCAACG). The outcome of real-time PCR was analyzed with SDS ver2.0 software (ABI, Foster City, CA). 18S rRNA assay reagents (ABI) were used as an internal control.
Spectral karyotyping. Medulloblastoma primary tumors were collected 4 hours after colcemid treatment (10 µg/mL i.p. injection). A total of six medulloblastoma (three Ptch1+/Ptch2+/, two Ptch1+/Ptch2/, and one Ptch1+/Ptch2+/) were subject to spectral karyotyping analysis. A single-cell suspension of medulloblastoma was subject to spectral karyotyping analysis. Spectral karyotyping procedures were done according to the SkyPaint hybridization and detection protocol (Applied Spectral Imaging, Vista, CA), and a commercially prepared spectral karyotyping probe was used to detect chromosomes. Sample pretreatment consisted of RNase A (100 µg/mL) for 1 hour at 37°C and pepsin for 2 minutes at 20°C (50 µg/mL in 10 mmol/L HCl), with counterstaining by 4',6-diamidino-2-phenylindole.
Sequence analysis of Ptch1 and Ptch2. To detect any mutations or deletion of the Ptch1 and Ptch2 genes, cDNA was synthesized from medulloblastoma and rhabdomyosarcoma RNA by an oligo-dT primed RT method using SuperScript II RNase H Reverse Transcriptase (Invitrogen). Using these cDNA samples as templates, full-length Ptch2 mRNA was amplified with the following primer sets: Ptch2, a combination of forward primer Ptch2seq1F (5'-AGCCTATGGCAGCGCTCAGATAACGCAGG) with reverse primer Ptch2seq1R (5'-CCTGCTGCCGCCCCAGCACAACCTCAGTT), or for two overlapping fragments of Ptch2, a combination of forward primer Ptch2seq1F with reverse primer Ptch2seqmt1 (5'-CAGCATCTGAATGACCTGAGCGGAGCAGG) and a combination of forward primer Ptch2seq5F (5'-ATTCCTGCGCTGCGGGCCTT) with reverse primer Ptch2seq1R. For Ptch1, two rounds of amplification were required as the level of Ptch1 expression was very low. The first round of PCR was done with forward primer Ptch1-14 (5'-ACGCGCAATGTGGCAATGGAAGGC) and reverse primer Ptch1-R1 (5'-GAAGCGGCCGCTTCAGATTTTAATTACCC) to amplify a full-length Ptch1. Subsequently, the PCR products were further amplified with following five different sets of primers whose products overlapped each other and spanned a full-length of Ptch1. Set A: forward primer Ptch1-F (5'-ATGGCCTCGGCTGGTAACG) and reverse primer Ptch1-1 (5'-AAGGCCGGTCCATGTACCCATGGC); set B: forward primer Ptch1-2 (5'-GCTTAATCATTACACCTTTGGACTGC) and reverse primer Ptch1-6 (5'-AAAGGAGCATAGTGCTTCTCTGC); set C: forward primer Ptch1-5 (5'-TTGAGCCACAGGCCTACACAGAGC) and reverse primer Ptch1-8 (5'-GTCTGAGGTGTCTCGTAGGCCG), set D; forward primer Ptch1-7 (5' TGGGAAACTGGGAGGATCATGC) and reverse primer Ptch1-10 (5' GCTCAGGCGAAGGAGTGGGCAGTCG); and set E: forward primer Ptch1-9 (5'-GTGGAGTTCACCGTCCACGTGGC) and reverse primer Ptch1-R2 (5'-GAAGCGGCCGCTCAGTTGGAGCTGCTCCCCCACGGC). The PCR products were sequenced by a routine Big Dye Terminator (v.3) Chemistry approach on Applied Biosystem 3700 DNA analyzer.
| Results |
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4 months of age). Ptch1+/ animals showed a high incidence of medulloblastoma after irradiation at early postnatal times (28). Again, Ptch2/ animals were similar to wild type, as low-dose ionizing radiation (4 Gy) at P5 did not induce medulloblastoma in Ptch2/ mice (data not shown). These data suggested that Ptch2 deficiency alone or in combination with p53 loss or ionizing radiation is insufficient to induce tumorigenesis. Finally, whereas Ptch1+/ P5 cerebella are radiosensitive and show increased ionizing radiationinduced cell death (15), Ptc2+/ and Ptc2/ cerebellum was similar to controls at 6 hours after 18 Gy of ionizing radiation (results not shown).
Ptch1 and Ptch2 compound mutants have increased tumor susceptibility. To further assess Ptch2 function, we examined potential genetic interactions between Ptch1 and Ptch2 during development and tumorigenesis. We intercrossed Ptch1+/Ptch2+/ mice to generate Ptch1+/Ptch2/ and appropriate control animals. Although mice harboring two mutant Ptch1 alleles were embryonic lethal, all other allelic combinations were obtained at expected frequencies. Ptch1+/Ptch2/ mice showed no overt phenotype, and anatomic analysis of embryos and adult brain showed normal histology (data not shown). However, we did find that many Ptch1+/Ptch2+/ and Ptch1+/Ptch2/ mutant animals suffered from intestinal serosal angiectasis (
19% and 18%, respectively; Fig. 3A
), implying a problem with blood vessel formation compared with Ptch1+/ animals (3.7%; Table 1
). Furthermore, we also found s.c. telangiectasia in 2 of 97 (2%) Ptch1+/Ptch2+/ animals.
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15% Ptch1+/Ptch2+/+ animals developed tumors by 12 months of age (Fig. 3B). However, with increasing age (>12 months), Ptc1+/ animals were less healthy and died with no obvious tumor burden at necropsy (Fig. 3B). Ptch1+/Ptch2/ compound mutant animals generally developed a similar spectrum of tumors to those of Ptch1+/, such as medulloblastoma and rhabdomyosarcoma (14, 27, 29), although with a much higher frequency (Fig. 3C; P = 0.05, medulloblastoma; P = 0.03, rhabdomyosarcoma; Table 1). To exclude genetic background effects, all data were acquired from later-generation than second-generation backcrosses. Furthermore, our current cohort is at the sixth generation, and increased tumorigenesis is apparent. Medulloblastomas from Ptch1+/Ptch2/ (as well as Ptch1+/+/Ptch2+/) animals were histopathologically similar to Ptch1+/ tumors and expressed typical neural markers, such as GFAP, Tuj1, and synaptophysin (Fig. 3D). Medulloblastoma signature genes (15), such as Gli1, Gli2, Math1, and Sfrp1, were also overexpressed in Ptch1/Ptch2 tumors as detected by in situ hybridization (Fig. 4A
), quantitative real-time PCR (Fig. 4B), and microarray analysis (data not shown). Although Ptch1+/ medulloblastoma expressed Ptch2 at high levels, the expression of Ptch2 in Ptch1+/Ptch2+/ (or Ptch1+/Ptch2/) medulloblastoma was much lower or absent (Fig. 4A and B), indicating that Ptc2 is not required per se for tumorigenesis. However, as the tumor incidence was increased similarly when either Ptch2+/ or Ptch2/ were present in combination with Ptch1+/ (Table 1), this indicates that the relative levels of Ptch2 can influence tumorigenesis in Ptch1+/ mice. We also generated Ptch1+/Ptch2/ (or Ptch2+/) mutant animals on a p53/ background, but in this situation, Ptch2 loss did not alter tumor latency, as Ptch1+/Ptch2/(Ptch2+/)p53/ tumor incidence was the same as Ptch1+/p53/ (data not shown).
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Ptch1 expression is lost in Ptch1+/Ptc2/ tumors. We checked if the decreased latency (Fig. 3B) observed in the Ptch1+/Ptch2+/ tumors involved loss of the WT Ptch2 allele. We sequenced Ptch2 cDNA derived from Ptch1+/Ptch2+/ tumor RNA samples (two sarcomas and two medulloblastomas) using high-fidelity PCR to amplify the Ptch2 open reading frame. We did not find any mutations in Ptch2 mRNA in the tumors (data not shown), suggesting that inactivation of the WT Ptch2 allele does not occur in Ptch1+/Ptch2+/ tumors. Furthermore, we amplified Ptch1 cDNA from the tumors and as previously reported (11, 13) did not find any mutations or deletions in the Ptch1 open reading frame (data not shown). However, using quantitative real-time PCR analysis with two different probe sets that can discriminate the mutant and WT Ptch1 alleles, we found that expression of the Ptch1 WT allele was absent or barely detectable in these tumors. In contrast, the level of Ptch1 in Ptch1+/Ptch2/ P5 and nonneoplastic adult cerebellum was comparable with those of WT samples (Fig. 5A ) with both sets of primer/probes. This strategy distinguishes the normal Ptch1 allele from the engineered Ptch1 mutation in which a LacZ gene interrupted Ptch1 exon2 (14), and the primer set that identifies Ptc1 exon 21 quantifies Ptch1 expression from both alleles. Therefore, a lack of expression of exon 2 indicates that the wild-type allele is silenced in medulloblastoma. We also examined Ptch1+/Ptch2+/, Ptch1+/Ptch2/, and Ptch1+/ medulloblastoma samples using spectral karyotype to identify if enhanced genomic instability may occur when Ptch2 levels are reduced but found no evidence of chromosomal rearrangements resulting from additional inactivation of Ptch2. Interestingly, one case of medulloblastoma (Ptch1+/Ptch2/) showed a loss of one chromosome 13 in which the Ptch1 gene is located (Fig. 5B), supporting the notion that Ptch1 loss, either by chromosomal loss or epigenetic silencing occurs in Ptc1+/-derived medulloblastoma, consistent with previous reports in Ptc1+/ mice (30).
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| Discussion |
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It is evident that there is a direct link between medulloblastoma and genomic instability induced either endogenously or exogenously. Defects in DNA strand break repair in animals [e.g., DNA ligase IV or poly(ADP-ribose) polymerase deficiency] can lead to genomic instability and transformation of neuroprogenitor cells in the developing cerebellum, resulting in medulloblastoma (39, 40). Furthermore, irradiation of neonatal Ptch1+/ animals can also substantially increase medulloblastoma occurrence (41) and can promote BCC precursor lesions to develop into nodular and infiltrative BCC (42). Therefore, we tested if DNA damage after ionizing radiation showed any differences in Ptch2/ compared with WT animals. However, in contrast to Ptc1+/ animals (15),
-radiation of Ptch2+/ or Ptch2/ P5 pups did not show any differences to controls as judged by radiation-induced apoptosis or increased tumor rate compared. These observations further confirm functional differences between Ptch1 and Ptch2.
Given the relatedness between Ptch1 and Ptch2, we introduced Ptch2 mutations onto a Ptch1+/ background. In this situation, we found that Ptch2 dosage dramatically affected the occurrence of tumors in Ptch1+/ animals. This was reflected as reduced tumor latency and also as the occurrence of frequent multiple tumors in Ptch1/Ptch2 mutants compared with Ptch1+/ animals. The comparable effect of Ptch2/ and Ptch2+/ toward tumorigenesis in the Ptch1+/ mice may reflect the fact that Ptch2 levels are substantially reduced in Ptch2+/ tissues. Similar to other murine models of medulloblastoma, we found that histopathologic analysis could not discriminate Ptch1+/Ptch2/ mutant tumors from Ptch1+/ tumors. Additionally, double Ptch1/Ptch2 mutations did not alter the molecular fingerprint of the medulloblastoma, as overexpression of Gli1, Gli2, Sfrp1, and Math1 still occurred. Thus, although Ptch1+/ tumor dynamics are affected in Ptch2 mutations, the tumor identity is very similar to tumors arising in Ptch1+/ animals.
Although our data describing tumorigenesis in the Ptch1+/Ptch2/ mice highlight the crosstalk between Ptch1 and Ptch2, other available data also support a role for PTCH2 for preventing tumorigenesis. PTCH2 is located on chromosome 1p33-34 in human, and a portion of chromosome 1 containing 1p33-44 was missing in >15% of various human tumors, including breast, colon, lung, ovarian cancer, melanoma, neuroblastoma, and testicular germ cell tumor (43). Independently, similar observations were made in neuroblastoma, testicular germ cell tumors, sporadic colorectal polyps, and meningiomas (20, 21, 4446). In contrast, it has been reported that high PTCH2 (Ptch2) expression occurs in familial and sporadic BCC (22) and in multiple models of murine medulloblastoma (15), although it is likely that in these cases, Ptch2 overexpression may reflect activated SHH signaling (47) rather than as a specific component of tumorigenesis. Therefore, the potential role of Ptch2 as a tumor suppressor in other physiologic contexts besides Ptch1 mutations is clearly an area for further investigation.
In summary, we have provided the first evidence that Ptch2 can modulate tumorigenesis in select settings. Our data likely reflect the requirement for Ptch2 for subtle aspects of HH signaling, which can enhance tumorigenesis when suboptimal levels are present, probably via collaboration with Ptch1 loss to maintain persistent SHH signaling.
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
We thank the Hartwell Center, the Cancer Center Cytogenetics Core, and the Transgenic Core facility for their help with these studies.
Received 2/ 8/06. Revised 4/18/06. Accepted 4/26/06.
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