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Epidemiology and Prevention |
1 Division of Hematology/Oncology, 2 Division of Endocrinology, and the 3 Women's Cancer Research Institute, Cedars-Sinai Medical Center, University of California at Los Angeles School of Medicine, Los Angeles, California; 4 Department of Anatomic Pathology, Tarzana Regional Medical Center, Tarzana, California; and 5 Department of Pharmaceutical Sciences, College of Pharmacy, University of Kentucky, Lexington, Kentucky
Requests for reprints: Ido Wolf, Division of Hematology/Oncology, Davis Building 5005, Cedars-Sinai Research Institute, University of California at Los Angeles School of Medicine, 8700 Beverly Boulevard, Los Angeles, CA 90048. Phone: 310-423-7759; Fax: 310-423-0225; E-mail: wolf-i{at}inter.net.il.
| Abstract |
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. Our results indicate for the first time that 15-PGDH may be a novel tumor suppressor gene in breast cancer, and suggest that this enzyme can modulate the ER pathway. (Cancer Res 2006; 66(15): 7818-23) | Introduction |
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Recently, we used a microarray-based strategy and conducted a global screen for epigenetically silenced tumor suppressor genes in breast cancer.7 We identified differential expression of 15-PGDH: high expression in the well-differentiated, estrogen receptor (ER)-positive MCF-7 cells and low expression in the poorly differentiated, ER-negative MDA-MB-231 cells. In the present study, we identified epigenetic silencing and reduced expression of 15-PGDH in a subset of breast cancer tumors and cell lines and noticed growth-inhibitory activities of 15-PGDH. Our results indicate 15-PGDH as an epigenetically silenced tumor suppressor gene in breast cancer.
| Materials and Methods |
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(F-10), anti-CAAT/enhancer binding protein (C/EBP)
, anti-C/EBPß (H-7), anti-BCL-2 (N-19), anti-p27Kip1 (C-19), and anti-cyclin D1 (H-295) were all from Santa Cruz Biotechnology (Santa Cruz, CA). The pcDNA3-15-PGDH (PGDH-WT), pcDNA3-mutant Y151F 15-PGDH (PGDH-Mut), and the C/EBP
and C/EBPß expression vectors were described previously (9, 12). The ER
expression vector was a generous gift of P. Chambon (University of Strasbourg, Strasbourg, France). The estrogen-responsive element (ERE)-luciferase reporter construct was kindly provided by D. Harris [University of California at Los Angeles (UCLA), Los Angeles, CA]. Patient samples. Samples were obtained, after informed consent, from surgically resected primary breast tumors of women diagnosed at Saitama Cancer Center (Saitama, Japan) from 1992 to 2000 and from women diagnosed at Tarzana Medical Center (Tarzana, CA) from 2002 to 2004. All samples were examined histologically for the presence of tumor cells.
Cells and transfections. Breast cancer cell lines were obtained from the American Type Culture Collection (Manassas, VA). All transfections used LipofectAMINE 2000 (Invitrogen, Carlsbad, CA). Stable clones were generated by selection in complete culture medium containing 500 mg/L G418.
Real-time reverse transcription-PCR. Total RNA was extracted using the RNeasy kit (Qiagen, Valencia, CA) and processed to cDNA with SuperScript II (Invitrogen). Primers were designed using PrimerBank8 and synthesized by Invitrogen. Amplification reactions were done with the Universal Taqman PCR Master Mix (Applied Biosystems, Foster City, CA) in triplicates in an iCycler iQ system (Bio-Rad, Richmond, CA) as described previously (12).
Bisulfite sequencing. Bisulfite modification was done with the EZ DNA Methylation kit (Zymo Research, Orange, CA). Methylation specific primers for the CpG island of 15-PGDH were designed by MethPrimer.9 For sequence analysis, the PCR products were subcloned into a pCR2.1 vector using TOPO TA Cloning kit (Invitrogen).
Chromatin immunoprecipitation assay. MDA-MB-231 cells were cultured with SAHA or with a control vehicle, and chromatin immunoprecipitation (ChIP) assay was conducted with acetylated histone H3 using the EZ Chip kit (Upstate, Lake Placid, NY). Primers for the 15-PGDH promoter were 5'-GGTAGGCTACCAGCGGCTCT-3' and 5'-GTTCCCATCTCGTAATCAGTGG-3'.
Generation of 15-PGDH-directed small interfering RNA. Two primers for 15-PGDH-directed small interfering RNAs (siRNA), directed against bases 69 to 97 (siRNA1) and bases 681 to 709 (siRNA2) of the human 15-PGDH, were designed using the RNA interference oligo retriever Web site10 and used together with a SP6 primer to clone the U6 promoter. The PCR product was inserted into the pCR2.1 vector (Invitrogen). A scrambled siRNA was designed by the same method and used as a control (control siRNA).
Western blot analysis. Cells were harvested and lysed for total protein extraction in a buffer containing 50 mmol/L Tris-Cl (pH 7.4), 150 mmol/L NaCl, and 2% NP40 together with a protease inhibitors cocktail (Roche Diagnostics, Basel, Switzerland). Approximately 50 to 150 µg of protein extracts were loaded on a 4% to 15% polyacrylamide gels (Bio-Rad), separated electrophoretically, and blotted from the gel onto polyvinylidene difluoride membrane. The membranes were then immunoblotted with the indicated antibodies.
15-PGDH activity assay. 15-PGDH activity was assayed by measuring the transfer of tritium from 15(S)-[15-3H]PGE2 to glutamate by coupling 15-PGDH with glutamate dehydrogenase as described previously (9).
Cell cycle assays. Following transfection with the indicated constructs, the cells were harvested, fixed in methanol, and stained with propidium iodide (Abcam, Cambridge, MA). Flow cytometry was done at the Flow Cytometry Core facility of Cedars-Sinai Medical Center (Los Angeles, CA).
Colony assays. Two days following transfection with the indicated plasmids, G418 (500 µg/mL) was added to the culture medium, and at day 14, the cells were stained using gentian violet. Untransfected cells were treated similarly, and all died within 2 weeks of culture in the selection medium. Quantification of the results was done using AlphaImager 2000 (Alpha Innotech, San Leandro, CA).
Luciferase assays. Cells were transfected with the reporter vector and the various constructs at a ratio of 1:1, and transfection efficiency was normalized using pRL-SV40. Luciferase assay was conducted according to the manufacturer's instructions (Promega, San Luis Obispo, CA).
Animal studies. Animals were maintained, and experiments were done under NIH and institutional guidelines at the Animal Core Facility, Cedars-Sinai Medical Center. Six-week-old female athymic nude mice were injected s.c. in both flanks with stably transfected cells resuspended in Matrigel (BD Biosciences, San Jose, CA), at a density of 1 x 106 viable cells/100 µL. Tumor size was measured with a linear caliper, and volume was estimated by using the equation V = (a x b2) x 0.5236, where a is the larger dimension and b is the perpendicular diameter. After 5 weeks, the tumors were removed and weighed.
Statistical analysis. The study variables were compared between the study groups using Fisher's exact test for categorical variables. Pearson's correlation coefficient was used to determine the relationship between continuous variables.
| Results |
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The 15-PGDH promoter contains a CpG island in the region 163 to +140 relative to the start ATG codon. We conducted bisulfite sequencing and analyzed the methylation status of this area in six breast cancer cell lines (MCF-7, MDA-MB-231, MDA-MB-436, BT-474, T-47D, and SK-BR-3) and identified methylation in MDA-MB-436 cells (Fig. 1C). Analysis of 10 primary breast cancers revealed methylation in three tumors. The methylation in primary tumors was less extensive than in MDA-MB-436 cells, but two areas were methylated in all three tumors, one near the TATA box and the other near a site of the methylation-sensitive transcription factor USF (1315). Importantly, these tumors showed reduced expression of 15-PGDH mRNA compared with either MCF-7 cells (<25%) or the unmethylated tumors.
We investigated the role of histone acetylation in 15-PGDH expression. ChIP analysis of MDA-MB-231 cells revealed an increased interaction of the 15-PGDH promoter with acetylated histone 3 following treatment with SAHA (Fig. 1D). This was associated with an increased expression of the gene (Fig. 1B). These findings suggest a role for histone deacetylation in the regulation of 15-PGDH expression in breast cancer.
15-PGDH induces growth inhibition of MDA-MB-231. MDA-MB-231 cells were transfected with either an empty vector (pcDNA3), wild-type 15-PGDH (WT), or mutated 15-PGDH (Mut) expression vectors (Fig. 2A ). Colony formation assays revealed 37% reduction in the number and size of surviving colonies following 15-PGDH expression (P < 0.05; Fig. 2B). No differences in the expression of BCL-2, COX-2, p27, p21, and cyclin D1 levels were noted following 15-PGDH overexpression (Fig. 2A; data not shown).
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We have recently identified tumor-suppressive activities of C/EBP
in breast cancer (12). As the 15-PGDH promoter contains several C/EBP consensus sites, the effects of C/EBP
and C/EBPß overexpression on 15-PGDH levels were investigated in MDA-MB-231 cells. Western blot (Fig. 2D) and real-time RT-PCR analysis (data not shown) revealed up-regulation of 15-PGDH by both C/EBPs; however, the effect of C/EBP
was more pronounced.
Down-regulation of 15-PGDH stimulates growth of MCF-7 cells. 15-PGDH-directed siRNA constructs (siRNA1 and siRNA2) and a control siRNA were prepared and transfected into MCF-7 cells. Analyses of 15-PGDH mRNA levels (data not shown) and protein expression (Fig. 3A ) revealed that siRNA1 effectively reduced expression of the gene. Colony formation assays showed that down-regulation of 15-PGDH significantly increased the ability of MCF-7 cells to form colonies (P < 0.05, for siRNA1 compared with the control siRNA and siRNA2; Fig. 3B). Cell cycle analysis using propidium iodide at 24 hours after transfection revealed that siRNA1 significantly increased the number of cells in S phase (39% for siRNA1 compared with 23% for control siRNA and 24% for the siRNA2, P < 0.05; Fig. 3C). Treatment of the cells with 4-HT completely inhibited this growth-stimulatory effect of 15-PGDH down-regulation.
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Association between 15-PGDH and the ER pathway. Inhibition of the ER pathway blocks the pro-proliferative effect of 15-PGDH down-regulation (Fig. 3C). The ERE-luciferase construct was used to analyze further the association between 15-PGDH and the ER pathway activity, and a 3.5-fold increase of the ERE-luciferase activity was noted following 15-PGDH silencing in MCF-7 cells (Fig. 4A
). No change was observed in ER
levels (Fig. 3A).
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Part of the activities of PGE2 in breast cancer is attributed to its ability to up-regulate aromatase activity (5). Indeed, silencing of 15-PGDH in MCF-7 cells resulted in a 6.7-fold increase of aromatase mRNA levels (Fig. 4C).
| Discussion |
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Recent data identified down-regulation of 15-PGDH expression by epigenetic mechanisms. In prostate cancer, the 15-PGDH promoter was found to be extensively methylated in one cell line, and clusters of DNA methylation were identified in 75% of primary tumors (11); in lung cancer, histone deacetylation was associated with 15-PGDH silencing.6 Our results suggest a role for both mechanisms, methylation of the promoter and histone deacetylation, in the silencing of 15-PGDH expression in breast cancer.
Both models of 15-PGDH manipulation, overexpressing in MDA-MB-231 cells and silencing in MCF-7 cells, suggest a role for this enzyme as a tumor suppressor gene in breast cancer. Similarly to studies in lung and colon cell lines, 15-PGDH overexpressing MDA-MB-231 cells showed a reduction of in vivo tumorigenicity (7, 9). As observed in a colon cancer model (7), the in vitro effects of overexpression of 15-PGDH in MDA-MB-231 cells were less impressive. These findings are consistent with the suggestions that PGE2 plays a particularly important role in promoting tumor angiogenesis (2, 7).
Several lines of evidence indicate interactions between PGE2/COX-2 and the ER pathway. For example, up-regulation of COX-2 in the ER-positive MCF-7 cells induced resistance to 4-HT (18), and in clinical samples, COX-2 expression is associated with reduced survival among patients with ER-positive tumors (4). At least part of the effects of PGE2 and COX-2 is mediated by induction of tumor aromatase. In clinical samples, COX-2 expression correlated with aromatase expression (19), and laboratory data revealed that COX-2 activates, and inhibitors of COX-2 suppressed, transcription of aromatase (20). Here, we identified an association between 15-PGDH expression and the ER pathway: increased E2 levels down-regulated expression of 15-PGDH, whereas down-regulation of 15-PGDH increased the ERE activity and aromatase levels. Moreover, inhibition of the ER pathway attenuated the effects of 15-PGDH on the cell cycle. Thus, our results add another dimension to the current model of the interactions between PGE2, COX-2, and the ER pathway (Fig. 4D).
Members of the C/EBP family of transcription factors are involved in mammary gland development (21). We have recently identified C/EBP
as a silenced tumor suppressor gene in breast cancer (12). Here, we show that C/EBP
and, to a lesser extent, C/EBPß up-regulate 15-PGDH expression. These findings suggest a novel mechanism for the growth-inhibitory activities of C/EBP
in breast cancer. Whether the effects of C/EBP
on 15-PGDH expression result from a direct interaction of C/EBP
with the 15-PGDH promoter remains to be elucidated.
In summary, this study identified 15-PGDH as an epigenetically silenced tumor suppressor gene in breast cancer and suggests that its aberrant expression may modulate the activity of the ER pathway.
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
| Footnotes |
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7 I. Wolf et al., submitted for publication. ![]()
8 http://pga.mgh.harvard.edu/primerbank/. ![]()
9 http://www.urogene.org/methprimer/. ![]()
10 http://katahdin.cshl.org:9331/RNAi/html/rnai.html. ![]()
Received 12/ 6/05. Revised 5/ 4/06. Accepted 5/17/06.
| References |
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in breast cancer. Clin Cancer Res 2005;11:318490.This article has been cited by other articles:
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