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Experimental Therapeutics, Molecular Targets, and Chemical Biology |
1 Laboratory of Cell Biology; 2 Genomics and Bioinformatics Group, Laboratory of Molecular Pharmacology; 3 Gene Silencing Section, Office of Science and Technology Partnerships, Office of the Director, Center for Cancer Research, National Cancer Institute; and 4 Laboratory of Biophysical Chemistry, National Heart Lung and Blood Institute, NIH, Bethesda, Maryland
Requests for reprints: Gergely Szakacs, Institute of Enzymology, Biological Research Center, Hungarian Academy of Sciences, Budapest, Hungary. Phone/Fax: 36-1-372-4353; E-mail: Szakacs{at}biomembrane.hu or Michael M. Gottesman, Laboratory of Cell Biology, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD. Phone: 301-496-1530; Fax: 1-301-402-0450; E-mail: mgottesman{at}nih.gov.
| Abstract |
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| Introduction |
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Of the 48 human ATP-binding cassette (ABC) transport proteins (6), P-glycoprotein (P-gp, a product of the MDR1/ABCB1 gene) is the best known and most important mediator of MDR (7, 8). The first mechanistic glimpse of P-gp-induced resistance came from the cloning of MDR1 and from sequence homology between P-gp and bacterial ABC transport proteins (8, 9). Since then, P-gp structure and function have been extensively characterized; its 12-transmembrane domains form a transmembrane pore and the two ATP-binding sites function to promote the promiscuous efflux of neutral to slightly cationic hydrophobic xenobiotics from cancer cells (10). Known substrates of P-gp include natural product antineoplastics, such as anthracyclines, Vinca alkaloids, taxanes, and epipodophyllotoxins. Innate or acquired expression of P-gp, therefore, is a major problem in cancer chemotherapy.
P-gp expression, frequently detected in human solid and hematologic cancers (11), is a marker of chemoresistance or decreased survival in leukemias (12), lymphomas (11, 13), osteosarcomas (14), small-cell lung cancers (15), and breast cancers (16), among other malignancies. Although current chemotherapy regimens can achieve complete response in some patients with solid tumors, recurrence is the norm. The recurrent tumors have often acquired MDR, either by adaptation of previously P-gp-negative cells or by selection of drug-resistant P-gp-positive clones. Elimination of such cells during initial treatment or at the time of recurrence is necessary to achieve cancer "cures." Several P-gp inhibitors, such as verapamil and PSC833, have successfully antagonized P-gp function both in vitro and in vivo. However, phase III clinical trials have been disappointing and no survival benefit of P-gp inhibition has yet been achieved (17, 18).
Recently, we used a bioinformatic approach to identify ABC transporter substrates [those with strong negative correlations between ABC transporter expression and growth inhibitory profiles of 1429 chemical compounds screened for anticancer activity in the National Cancer Institute (NCI) cancer cell panel (the NCI-60; ref. 19)]. Unexpectedly, several compounds, including NSC73306 (Fig. 1 ), showed a positive correlation between MDR1 expression and drug efficacy, suggesting that their toxicity was potentiated, rather than antagonized, by P-gp. In the present study, we examined the phenomenon of P-gp-mediated hypersensitivity to NSC73306, using several cancer cell lines expressing various amounts of P-gp, combined with a variety of methods that modulate P-gp function. Molecular characterization of cells selected for resistance to NSC73306 revealed loss of P-gp expression and consequent loss of the MDR phenotype. Taken together, our results suggest that NSC73306 (and other "MDR1-potentiated" agents) are candidate agents for treatment of multidrug resistant cancers expressing P-gp.
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| Materials and Methods |
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Growth of cells and analysis of drug sensitivity. Cell lines used included KB-3-1 and its MDR derivatives (KB-8-5, KB-8-5-11, and KB-V1; refs. 20, 21), HCT-15 (colon cancer), and NCI/ADR-RES (NCI/ADR-RES was initially thought to be a selected resistant variant of MCF7 and, therefore, called MCF7/ADR; ref. 22). The designation was later changed to NCI/ADR-RES when the cell line was found to be unrelated to MCF-7 (23). Spectral karyotyping and other evidence have since shown it to likely be of ovarian origin (24). Before sensitivity assays, cell lines were maintained in DMEM supplemented with 10% FCS (BioWhittaker, Walkersville, MA), penicillin (50 units/mL), streptomycin (50 µg/mL), L-glutamine (BioWhittaker), and colchicine or vinblastine (KB-V1 cell lines only; ref. 25). NCI/ADR-RES cells used for RNA interference (RNAi) experiments were first maintained in doxorubicin (1 µmol/L); this resulted in an increased doxorubicin IC50 value for this cell line when used for short interfering RNA (siRNA) experiments compared with the unselected cells used for 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assays (Table 1 ). Cell survival was measured by the MTT assay (26). Cells were seeded in 100 µL medium at a density of 5,000 per well in 96-well plates, and serially diluted drugs (with or without P-gp inhibitor) were added the following day in an additional 100 µL medium to give the indicated final concentrations. The P-gp inhibitors PSC833 and XR9576 were used at nontoxic concentrations (1 µmol/L and 50 nmol/L, respectively) as determined by cytotoxicity assays (not shown). Cells were then incubated for 72 hours at 37°C in humidified 5% CO2, and the MTT assay was done following the instructions of the manufacturer (Molecular Probes, Eugene, OR).
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Immunoflow cytometry. Surface protein levels were analyzed by staining with the MRK16 antibody (28). Briefly, cells were harvested, and 250,000 cells were suspended in 200 µL DMEM [10% fetal bovine serum (FBS)] containing 2.5 µg MRK16 for 30 minutes at 4°C. The cells were pelleted, washed once with 200 µL DMEM, resuspended in 200 µL DMEM (10% FBS) containing 2.5 µg FITC-labeled anti-mouse IgG2a, and incubated for 30 minutes at 4°C. The cells were again pelleted, washed once with 200 µL DMEM (10% FBS), and resuspended in 300 µL PBS containing 0.1% bovine serum albumin for fluorescence-activated cell sorting (FACS) analysis. Cells incubated with mouse IgG2a
isotype control, instead of MRK16, followed by incubation with FITC-labeled antimouse IgG2a were used to assess nonspecific labeling. For RNAi analysis, the reported reduction in P-gp expression, assayed by MRK16, reflects the average and SD of three independent experiments, as measured by comparing the background corrected median fluorescence of cells exposed to either MDR1-siRNA or negative control siRNA. The P-gp expression of HCT-15 cells selected in NSC73306 was compared with that of unselected cells.
Design of siRNAs. The siRNAs used in these studies were obtained from Qiagen, Inc. (Germantown, MD). The siRNA directed against MDR1 (ABCB1) corresponds to nucleotides 3,484 to 3,504 of the reference sequence (NM_000927). The siRNA duplex consists of 5'-r(CGGAAGGCCUAAUGCCGAA)dTdT (sense) and 5'-r(UUCGGCAUUAGGCCUUCCG)dTdG (antisense) strands. The negative siRNA duplex consists of 5'-r(ACGUGACACGUUCGGAGAA)dTdT and 5'-r(UUCUCCGAACGUGUCACGU)dTdT strands.
Evaluation of the effect of MDR1-targeted siRNA on drug sensitivity. Cytotoxicity experiments were done in 96-well plates. For transfections, siRNA (5 pmol) was added to individual plate wells in 25 µL serum-free DMEM. siLentFect lipid reagent (Bio-Rad Laboratories, Hercules, CA) was subsequently added to siRNA-containing wells in 25 µL serum-free DMEM to provide a final lipid/siRNA ratio of 2:1 (w/w). The resulting mixture was allowed to complex for 30 minutes at ambient temperature. Cells (3,500) were then added in 50 µL DMEM containing 20% FBS to yield transfection mixtures consisting of 50 nmol/L siRNA in DMEM containing 10% FBS. The final mixture was incubated at ambient temperature for 45 minutes before being placed at 37°C in a humidified atmosphere containing 5% CO2. Experiments conducted in growth medium only were done as described in the steps above except that no siRNA or lipid was added. After 24 hours, the medium was replaced with 100 µL fresh DMEM containing 10% FBS. The medium was replaced 72 hours after transfection with medium containing various concentrations of doxorubicin or NSC73306 in DMEM (200 µL, 10% FBS, and 1% DMSO). For experiments using PSC833, the medium was replaced with the same concentration of doxorubicin or NSC73306 in the presence of 2 µmol/L PSC833 (200 µL, 10% FBS, and 1% DMSO). After 72 hours, the medium was removed and cells were washed once with 100 µL DMEM containing 10% FBS, before adding 100 µL fresh DMEM containing 10% FBS. Cell viability was then assayed with the CellTiter 96 Aqueous One Solution Proliferation Assay reagent (Promega, Madison, WI). Absorbance at 490 nmol/L was measured 90 minutes after addition of the reagent on a Wallac 1420 plate reader (Perkin-Elmer, Wellesley, MA). IC50 values were calculated using GraphPad Prism software version 4.0a (GraphPad Software, San Diego, CA). RNAi-mediated knockdown of MDR1 in KB-8-5-11 cells required two changes to the above protocol: (a) the lipid/siRNA ratio was increased to 4:1 (w/w) and (b) doxorubicin or NSC73306 was added 48 hours after siRNA to account for faster growth kinetics.
Measurement of ATPase activity. High Five insect cells (Invitrogen) were infected with recombinant baculovirus carrying the human MDR1 cDNA with a six-histidine tag at the COOH-terminal end [BV-MDR1(H6)]. The cells were harvested, their membranes were isolated, and the membrane protein concentrations were determined as described previously (29). Membranes were kept at 80°C and used within 6 months of preparation. Drug-stimulated ATPase activity of the isolated membranes was measured as described elsewhere (30).
Calcein-AM assay. Trypsinized cells were washed twice in PBS. Cells (5 x 105) were then preincubated for 5 to 30 minutes at 37°C in Iscove's modified Dulbecco's medium (Quality Biologicals, Gaithersburg, MD) with various concentrations of NSC73306. Calcein-AM was added to a final concentration of 0.25 µmol/L, and the cells were incubated for 10 minutes at 37°C, then sedimented by centrifugation and resuspended in PBS. Green fluorescence intensity was measured using a FACSCalibur flow cytometer equipped with a 488 nm argon laser (Becton Dickinson Biosciences, San Jose, CA). Acquisition of events was stopped at 10,000.
Statistical analysis. Data are the means ± SD from duplicate or triplicate samples of at least three independent experiments. Differences between the mean values were analyzed by two-sided Student's t test and results were considered statistically significant at P < 0.05.
| Results |
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Potentiation of NSC73306 toxicity requires functional P-gp. PSC833, a cyclosporine D analogue, is known to inhibit P-gp function in vitro at a concentration of 1 µmol/L (31). That concentration was effective in inhibiting P-gp function in all KB gradient cell lines with no direct toxicity. As expected, inhibition of P-gp with PSC833 eliminated the resistance of MDR KB cell lines to doxorubicin (Fig. 2C). To test if the paradoxical hypersensitivity of P-gp-expressing cells required functional P-gp, NSC73306 was coadministered with PSC833. In that setting, P-gp-positive KB cells were not significantly more sensitive to NSC73306 than were P-gp-negative KB-3-1 cells, suggesting that functional P-gp was required to induce sensitivity (Fig. 2D). To confirm that P-gp function was required for the potentiation of NSC73306 toxicity, a highly specific inhibitor, XR9576, was also evaluated in the KB series (32). XR9576 (50 nmol/L) was comparable in effect to PSC833 (1 µmol/L) in reversing NSC73306 sensitivity and doxorubicin resistance (Fig. 2). Figure 2E and F displays the IC50 values and 95% confidence intervals for cells exposed to either doxorubicin or NSC73306 (±P-gp inhibitors), respectively.
P-gp-mediated sensitivity to NSC73306 occurs in cells with intrinsic or acquired MDR. To test if the observed potentiation of cytotoxicity was restricted to MDR KB cells, we characterized other cell lines known to express P-gp. HCT15 colon cancer cells, which constitutively express high levels of P-gp, were used to profile the toxicity of NSC73306 in a nonselected cell line. The P-gp inhibitor PSC833 was used to establish the extent of P-gp-mediated sensitization or resistance. In MTT assays, HCT15 cells were 4-fold more sensitive to NSC73306 than were HCT15 cells cotreated with NSC73306 and PSC833 (Table 1). Similarly, PSC833 decreased the sensitivity of NCI/ADR-RES cells known to express high levels of P-gp (Table 1).
siRNA knockdown of MDR1 decreases sensitivity to NSC73306. PSC833 and XR9576 are relatively specific P-gp inhibitors. However, each can potentially interact with other molecular targets. To determine whether nonpharmacologic inhibition of P-gp would also reverse sensitivity to NSC73306, RNAi was directed against MDR1 mRNA in drug-resistant NCI/ADR-RES and KB-8-5-11 cells. Gene silencing was achieved by transfection of a 21-nucleotide synthetic siRNA (MDR1-siRNA) and the efficacy of down-regulation was assayed 72 hours after transfection. MDR1 mRNA levels were reduced by an average of 74% (± 3.5%) in NCI/ADR-RES cells treated with MDR1-siRNA, compared with the levels in cells transfected with a negative control siRNA (data not shown). Concomitantly, cell surfaceassociated P-gp was assayed by flow cytometry through binding of the MRK16 antibody; P-gp was reduced by an average of 68% (±6.1%) for NCI/ADR-RES cells following treatment with MDR1-siRNA, compared with cells transfected with negative control siRNA (data not shown). A similar reduction in P-gp levels was noted for KB-8-5-11 cells (54 ± 2.5%).
After establishing experimental conditions for siRNA knockdown of P-gp expression, we assayed the effect of P-gp-mediated resistance and sensitivity to doxorubicin and NSC73306, respectively, in NCI/ADR-RES cells. For these experiments, cells were transiently transfected with MDR1-siRNA or negative control siRNA; cells grown in parallel in the absence of transfection reagents served as an additional negative control. Seventy-two hours after transfection, either doxorubicin or NSC73306 were added (±PSC833) to a separate set of cells treated with growth medium only. Growth inhibition was analyzed 72 hours after drug addition by 3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium, inner salt, assay. As shown in Fig. 3A , NCI/ADR-RES cells treated with MDR1-siRNA were 7-fold more sensitive to doxorubicin than cells exposed to negative control siRNA. The observed modulation of growth inhibition by doxorubicin is consistent with previously reported data (33). There was no difference between cells transfected with the negative control siRNA and cells not exposed to transfection reagent, indicating that transfection itself did not appreciably affect the cytotoxicity of doxorubicin. In contrast, treatment with MDR1-siRNA reduced the sensitivity of NCI/ADR-RES cells to NSC73306 by 2.5-fold, relative to cells exposed to control siRNA or medium alone (Fig. 3B). Analogous results were obtained in KB-8-5-11 cells where resistance to doxorubicin (Fig. 3C) and sensitivity to NSC73306 was slightly reduced following RNAi-mediated P-gp knockdown (Fig. 3D). Statistical analysis of three independent experiments indicated a modest, but significant protection of KB-8-5-11 against NSC73306 (P = 0.014; two-sided paired t test of IC50 values). Figure 3E and F displays the IC50 values and 95% confidence intervals for experiments done using NCI/ADR-RES and KB-8-5-11 cells, respectively.
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NSC73306 is not a classic P-gp inhibitor. Because P-gp function seemed to be a prerequisite for the enhanced toxicity of NSC73306, we evaluated the interaction of P-gp and NSC73306 using various biochemical assays. To test if NSC73306 has a direct effect on the transporter, we conducted ATPase activity measurements using crude membranes purified from insect cells expressing human P-gp (34). The ATPase activity of P-gp is often stimulated in the presence of transported substrates, such as prazosin or verapamil, and this activation is prevented by classic P-gp inhibitors, such as PSC833. In contrast to verapamil or prazosin, NSC73306 did not stimulate the basal catalytic activity, and, unlike PSC833, did not prevent the stimulation of the ATPase, suggesting that it does not interact with P-gp (Fig. 5A ). Consistent with this notion, NSC73306 did not alter the P-gp-mediated Calcein-AM efflux of KB-V1 cells (Fig. 5B).
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| Discussion |
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To characterize the selectivity of NSC73306 for P-gp-expressing cells, four KB epidermoid carcinoma cell lines expressing increasing levels of P-gp were evaluated. Comparison of those nearly isogenic lines led to three major conclusions: (a) although NSC73306 was most effective in cells expressing the greatest amounts of P-gp, with associated high-level drug resistance, substantial sensitivity was observed even at lower levels of P-gp expression. Preferential toxicity of NSC73306 was observed even in the KB-8-5 human epidermoid cell line that expresses P-gp at modest levels typical of human tumors in vivo (20, 21); (b) no growth inhibition was observed in P-gp-negative cells when used at concentrations effective in P-gp-positive cells; and (c) sensitivity to NSC73306 was proportional to both the expression and function of P-gp. These findings substantiated and complemented our previous results using a tetracycline-regulated expression system, which relied upon binary "all-or none" expression models (19).
The results obtained using multiple inhibitors (PSC833 and XR9576) and RNAi experiments strongly supported the third conclusion. Interestingly, the extent of cytotoxic modulation mediated by RNAi directed against MDR1 was inferior to that of PSC833, a chemical-based P-gp inhibitor. This small, but statistically significant effect is most likely explained by the incomplete inhibition of MDR1 by RNAi, as residual P-gp expression (i.e., P-gp has a long half-life on the plasma membrane) is likely to be sufficient to maintain intermediate resistance to doxorubicin and sensitivity to NSC73306.
The effect of NSC73306 on the HCT-15 human colon cancer cell line was particularly encouraging, because as many as 73% of colon cancers constitutively express high levels of P-gp (3840). Furthermore, P-gp-dependent sensitivity of HCT-15 colon cancer cells to NSC73306 suggests that hypersensitivity occurs not just in chemotherapy-selected cell lines, but also in cancers that intrinsically express P-gp. Our results provide preliminary evidence for the applicability of NSC73306 to other tumor types, such as leukemia, sarcoma, renal cancer, and adrenocortical cancer that also intrinsically express P-gp (11, 39). For several tumor types, the precise contribution of P-gp to drug resistance has been difficult to quantify because these tumors are often resistant to MDR1 substrates and nonsubstrates alike. Further experiments will therefore be required to determine if drug sensitivity also extends to these diverse tumor types.
Unexpectedly, expression of P-gp in MDR cell lines decreased after only a 3-week exposure to NSC73306. This loss of P-gp expression further supports the causal link between the toxicity of NSC73306 and P-gp function. It is unknown whether reduction of P-gp levels was secondary to adaptation of P-gp-positive cells or was the result of the death of P-gp-positive cells with resultant selection for P-gp-negative cells. If ascribed to adaptation of P-gp-positive cells, then NSC73306 may, in fact, have the added benefit of P-gp inhibition, albeit due to protein down-regulation rather than interference with efflux function. Immunofluorescence studies using a P-gp-GFP fusion protein and anti-P-gp fluorescent antibodies should aid in resolving this dilemma and are now in progress.
At present, little is known about the mechanism of action. NSC73306 could interact directly with P-gp, or with a downstream, P-gp-dependent event. Functional assays, measuring P-gp-mediated ATP consumption and drug efflux, were done to evaluate these possibilities. P-gp-mediated transport is coupled to ATP hydrolysis that is often stimulated by transported substrates (34, 41). The profile of the drug-stimulated ATPase reflects the nature of interaction: compounds may be substrates, inhibitors, or may have no effect on the transporter. In the presence of transported substrates, the ATPase activity of P-gp usually increases. Noncompetitive inhibitors, or compounds transported at a lower rate, inhibit the ATPase activity of the stimulated transporter. NSC73306 neither stimulated nor inhibited the ATPase, suggesting that it does not interact with P-gp. However, there are substrates and inhibitors that have little effect on the P-gp-mediated ATPase, and the assay conditions using insect cell membranes may not be relevant if active metabolites are formed in cancer cells. Consequently, the ability of NSC73306 to inhibit P-gp-mediated transport was also evaluated in an intact cell system. When extrusion by P-gp is blocked by an agent that interferes with P-gp function (e.g., verapamil), fluorescent Calcein rapidly accumulates within the cell (Fig. 5B; ref. 42). KB-V1 cells remained dim in the presence of NSC73306, suggesting that it does not compete with Calcein-AM transport. Thus, NSC73306 does not seem to be a substrate or inhibitor of P-gp (at least for Calcein-AM transport), indicating that the increased sensitivity of KB-V1 cells cannot be explained by the direct effect of NSC73306 on P-gp. Therefore, we hypothesize that the target of NSC73306 is a downstream event. This event is both P-gp-dependent, as the potentiation of NSC73306 toxicity requires functional P-gp, and P-gp-specific, as expression of ABCC1 (MRP1) or ABCG2 failed to sensitize cells to NSC73306 (data not shown).
Collateral sensitivity of cells expressing high levels of P-gp to detergents and verapamil is well documented in the literature (4345). Although never fully explained, their effects have been attributed either to alterations in plasma membrane properties or activation of ATPase to a level that produces cell stress. This latter mechanism of cytotoxicity has already been reported for poly(ethylene oxide)-poly(propylene oxide) block copolymers (Pluronic or "poloxamer"), which effectively rob the cell of its energy supply (46). These poloxamer-type molecules, however, have no direct cytotoxicity when used alone, but only when combined with a P-gp substrate capable of stimulating transporter-mediated drug efflux. Similarly, P-gp-expressing cells have been shown to be hypersensitive to 2-deoxyglucose, presumably because reserves of ATP are depleted by rapid consumption that occurs during active transporter function (47). Because NSC73306 does not promote P-gp-mediated ATP hydrolysis, its enhanced toxicity in drug-resistant cells is not likely to be mediated by ATP-depletion caused by P-gp (39, 48).
The precise mechanism of action of NSC73306 remains an active area of investigation. Elucidation of this mechanism should not only facilitate nascent methods of circumventing drug resistance in cancer, but will likely further our understanding of ABC transporter function and regulation. Future preclinical studies evaluating the pharmacokinetic properties and therapeutic index of this novel antineoplastic will, hopefully, lead to additional targeted therapies for improved care of patients with cancer. As with other P-gp-targeted therapeutics under development, translation to the clinical domain must proceed with caution, with particular attention to potential toxicities in normal human tissues (e.g., blood brain barrier, placenta, liver, colon, and kidney) that intrinsically express P-gp.
In summary, we have shown that NSC73306 exhibits selective toxicity in P-gp-expressing cancer cells. This occurs by two separate, but closely related, mechanisms. First, the toxicity of NSC73306 is directly proportional to the levels of functional P-gp. Second, P-gp expression decreases in cells treated with NSC73306, which renders cells sensitive to the very P-gp substrates against which they had previously shown resistance. Taken together, these two mechanisms offer the promise of improving cancer treatment, especially in those tumors that are most resistant to MDR1 substrates.
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
We thank the staff of NCI Developmental Therapeutics Program for generation of the pharmaceutical database used in this study, Dr. Thomas Spande (National Institutes of Diabetes, Digestive and Kidney Diseases, Bethesda, MD) for performing atmospheric pressure chemical ionization mass spectrometry, George Leiman for editorial assistance, Dr. Anna Maria Calcagno for critically reviewing the manuscript, and Qiagen for the design and synthesis of siRNAs.
| Footnotes |
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Current address for G. Szakács: Institute of Enzymology, Biological Research Center, Hungarian Academy of Sciences, Budapest, Hungary, where he is a Bolyai Fellow and a Special Fellow of the Leukemia and Lymphoma Society.
Received 9/15/05. Revised 1/17/06. Accepted 3/ 1/06.
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