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Molecular Biology, Pathobiology, and Genetics |
Departments of 1 Medical Biophysics and 2 Biochemistry, University of Toronto; 3 Department of Surgery, Samuel Lunenfeld Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada; and 4 Department of Cancer Biology, Vanderbilt-Ingram Cancer Center, Nashville, Tennessee
Requests for reprints: Liliana Attisano, Department of Biochemistry, Terrence Donnelly Centre for Cellular and Biomolecular Research, Room 1008, 160 College Street, University of Toronto, Toronto, ON, Canada M5S 3E1. Phone: 416-946-3129; Fax: 416-978-8548; E-mail: liliana.attisano{at}utoronto.ca.
| Abstract |
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| Introduction |
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TGF-ß and Wnt ligands regulate a number of common processes during embryonic development, such as patterning of imaginal discs in Drosophila and tissue specification and organogenesis in vertebrate embryos (2). These pathways can coordinate developmental events by regulating the expression of target genes such as cerberus, chordin, crescent, goosecoid, noggin, siamois, and Xtwn in the Xenopus Spemann organizer, and Id2 and Msx1 in mammalian cells (4, 5). Further, mutations affecting the integrity of both the Wnt and TGF-ß pathways in human malignancies have been extensively reported. For instance, mutations in the human TGF-ß type II receptor, Smad2, and Smad4 occur in colon tumors; Smad4 mutations are found in a high percentage of pancreatic cancers (6). Activation of the Wnt/ß-catenin pathway through a variety of mechanisms is also widespread in human tumors. For instance, in sporadic colorectal cancers, biallelic loss of APC occurs in up to 85% of cases, with most remaining cases harboring ß-catenin mutations (2). Although mutations in APC, Axin, and ß-catenin are rare in human breast cancers, accumulation of nuclear ß-catenin, a hallmark of Wnt pathway activation, is seen in
60% of clinical breast cancer samples (7). The most common mechanisms of Wnt pathway activation in breast cancers involve loss of expression of secreted frizzled-related protein 1 and Wnt inhibitory factor 1 through promoter methylation and overexpression of Wnt ligands (810). In addition, a number of signaling pathways with known alterations in breast cancers can affect ß-catenin function. These include the epidermal growth factor, insulin-like growth factor, integrin-linked kinase, and Akt pathways, as well as the tumor suppressors p53 and PTEN (10).
Despite an established role in suppressing tumor formation, the TGF-ß pathway can also act as a promoter of tumor invasion at later stages of tumorigenesis (11). Whereas most tumors of epithelial origin lose the ability to be growth inhibited by TGF-ß through various molecular or mutational mechanisms, retention of a partially functional pathway favors a more aggressive tumor behavior and consequently a less favorable prognosis (11). TGF-ß has been shown to synergize with oncogenic pathways in various systems. For example, transgenic mice overexpressing the HER2/Neu oncogene and TGF-ß1 under the control of the MMTV promoter have increased invasiveness and a higher frequency of lung metastasis compared with single transgenics (12). Similarly, evidence suggests that Wnts can also cooperate with other signaling pathways during tumorigenesis. For instance, in MMTV-Wnt1 mice, targeted deletion of the estrogen receptor
delays tumor formation, and bigenic mice carrying fibroblast growth factor-3 driven by MMTV and MMTV-Wnt1 develop tumors faster than mice with either transgene alone (13, 14). Interestingly, MMTV-Wnt1 mice crossed with MMTV-TGF-ß1 mice show no alterations in tumor formation,5 suggesting that TGF-ß cannot inhibit the growth of epithelial cells stimulated by Wnt1. We and others have previously described a mechanism for cooperative transcriptional regulation by mediators of the TGF-ß and Wnt pathways (15). Synergistic gene induction involves direct physical interaction between Smads and LEF/TCF proteins coincident with DNA binding by the complex to target promoters such as Xtwin, Msx2, and Gastrin (1618). Despite strong evidence that TGF-ß and Wnt factors cooperatively regulate developmental and homeostatic processes, little is known about the specific transcriptional targets that are controlled by a combination of these ligands and whether a direct interplay of these two pathways regulates the various stages of tumorigenesis.
In this study, we have defined a novel transcriptional program induced by TGF-ß and Wnt that could not have been predicted by the analysis of the single ligand treatments alone. Further, we show that many of these cooperative targets display increased expression in tumors, suggesting that these two pathways may cooperate to promote tumor development.
| Materials and Methods |
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-MEM with 10% FBS. Constructs, nuclear accumulation assays, and immunoblotting. The Smad-binding elements (SBE)-TOP plasmid was constructed by inserting two SBEs upstream of the LEF/TCF binding sites in the pGL3-OT version of TOPFLASH (20). For reporter assays, normal murine mammary gland (NMuMG) cells were transfected using LipofectAMINE (Invitrogen, Carlsbad, CA) as previously described (16). LS1034 cells were transfected using Fugene 6 according to the manufacturer's instructions (Roche Diagnostics, Indianapolis, IN). For nuclear accumulation assays, NMuMG cells were incubated in control conditioned medium for 20 h, and TGF-ß or Wnt3a was added for the indicated times. The cells were fixed, permeabilized, and proteins were detected using a mouse monoclonal antiß-catenin antibody (1:1,000; BD Transduction Laboratories, BD Biosciences, San Jose, CA) or rabbit polyclonal anti-Smad4 antibody (1:500; Santa Cruz Biotechnology, Santa Cruz, CA) followed by a FITC-conjugated secondary antibody (Jackson ImmunoResearch, West Grove, PA) and 4',6-diamidino-2-phenylindole staining. Nuclear versus cytoplasmic fluorescence was quantitated using the ArrayScan II reader and Cellomics Nuclear Translocation software (Cellomics, Pittsburgh, PA). Phosphorylated Smad2/3 was detected by Western blotting using rabbit polyclonal antiphospho-Smad2 antibody (1:2,000; Cell Signaling Technology, Danvers, MA).
Microarray processing and analysis. RNA was extracted from NMuMG cells with TRI reagent (Sigma-Aldrich, St. Louis, MO) then purified using the RNeasy kit (Qiagen, Valencia, CA). Indirect Cy3/Cy5 labeling of cDNAs, hybridization, and array processing was done using standard protocols6 with in-house pair-spotted 70-mer oligonucleotide arrays (SLRI_MO7K) representing 6,868 mouse genes from the UniGene database (Unigene Mm build 83; Array-Ready Oligo set, OPERON). Scanning and analysis was done with the GenePix 4000B scanner and software (Axon Instruments, Molecular Devices, Sunnyvale, CA). For analysis, fluorescence data were mean-centered and a ligand/control expression ratio was computed and log2 transformed. The data were sorted by decreasing or increasing median ratio to generate induced and repressed lists, respectively. Data were obtained for six independent experiments with reciprocal Cy3/Cy5 labeling for a total of 12 hybridizations per condition. For the final analysis, all experiments were used for individual Wnt3a and TGF-ß treatments, whereas seven hybridizations were used for the combined Wnt3a+TGF-ß treatment.
Mouse and human tumor samples. Min (many intestinal neoplasia; APC+/) mice bred on the C57BL/6J strain were obtained from The Jackson Laboratory (Bar Harbor, ME). Representative colon and small intestinal polyps and a matched normal sample were macroscopically harvested at 5 months of age.
The MMTV-Wnt1 transgenic mice, obtained from H.E. Varmus (Program in Cancer Biology and Genetics, Memorial Sloan-Kettering Cancer Center, New York, NY), were bred to MMTV/DNIIR animals (14) to generate MMTV-Wnt1/DNIIR mice. The Wnt1 transgene was detected by Southern blot (14) or PCR, whereas the DNIIR transgene was detected by PCR as previously described (21). Virgin Wnt1 heterozygotes (24 females) and multiparous Wnt1/DNIIR heterozygotes (19 females) were used in the tumor study. Mammary tumors were removed 3 to 4 weeks after detection.
Human familial adenomatous polyposis (FAP) tumor samples were collected from eight clinically affected individuals with FAP from separate kindreds. Informed consent for tissue use was obtained from each patient as per local Institutional Review Board approval. Matched normal (six samples) and adenomatous tissues (eight samples) were dissected from fresh surgical colectomy specimens.
Mouse and human tissues were fixed in 4% paraformaldehyde or 10% buffered formalin, embedded in paraffin for sectioning, or frozen at 80°C in RNAlater (Ambion, Austin, TX), and subsequently processed for RNA extraction with TRI reagent (Sigma-Aldrich).
Real-time quantitative reverse transcription-PCR analysis. Reverse transcription was done with random hexamers on DNaseI-treated total RNA with Superscript II (Invitrogen). Real-time PCR was done using the ABI/Prism 7000 Sequence Detection System (Applied Biosystems) and the Brilliant SYBR Green QPCR master mix (Stratagene, La Jolla, CA). Primer pairs (Supplementary Table S3) designed using Primer Express (Applied Biosystems) were used at 100 nmol/L and were validated against hypoxanthine phosphoribosyltransferase (HPRT) or glyceraldehyde-3-phosphate dehydrogenase (GAPDH) by comparative standard curve analysis. Relative quantitation was calculated by the 
Ct method normalized to HPRT or GAPDH.
Immunohistochemistry, in situ hybridization, and cancer profiling array hybridization. Paraffin-embedded tissue sections (7 µm) were prepared using standard protocols. Immunohistochemical staining was done using the horseradish peroxidase-AEC kit (R&D Systems, Minneapolis, MN) with mouse monoclonal antiß-catenin (1:1,000; BD Transduction Laboratories) or rabbit antiphospho-Smad2 (1:500; Cell Signaling Technology) and counterstained with Hematoxylin QS (Vector Laboratories, Burlingame, CA). Digoxigenin-labeled RNA probes (Supplementary Table S3) for in situ hybridizations were synthesized from sequence-verified mouse cDNAs cloned from NMuMG into pBluescript(KS). Hybridizations were done using standard protocols. A pBluescript(KS)-InhibinßA human cDNA construct was used to synthesize a [32P]dATP-labeled DNA probe with the Rediprime II DNA labeling kit (Amersham Biosciences). The probe was hybridized to the Cancer Profiling Array II (Clontech, Mountain View, CA) according to the manufacturer's instructions, scanned with the STORM phosphorimager reader, and analyzed with ImageQuant (Molecular Dynamics, Sunnyvale, CA).
| Results |
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7,000 known genes. Lists of regulated genes for each condition were determined (Supplementary Table S1) as described in Materials and Methods. Treatment of cells with TGF-ß alone resulted in the regulation of novel as well as known targets, such as Bmp1, Ctgf, Serpine1/plasminogen activator inhibitor-1 (PAI-1), and Edn1 (2225). Similarly, genes regulated by Wnt3a included both novel (Hs3st1, SerpinB9, Ccna2, Sgk) and previously characterized targets such as Ahr, Axin2, Spp1, Ccnd1, and Thbs1 (2630). These results confirm that NMuMG cells respond appropriately to TGF-ß and Wnt3a and show the validity of our approach. Interestingly, cells costimulated with TGF-ß and Wnt3a displayed an expression profile distinct from that observed with single ligand treatments (Fig. 1C). Thus, simultaneous receipt of TGF-ß and Wnt signals yields a gene expression profile that is not simply an additive effect of individual ligand treatments.
Validation of TGF-ß and Wnt3a-induced target genes by real-time quantitative reverse transcription-PCR. Given the limited sensitivity range typical of microarrays and the need for secondary validation, we next examined the expression of candidate targets using real-time quantitative PCR, focusing on induced genes. We selected the first 25 to 30 highest ranked genes from each treatment condition (Wnt3a, TGF-ß, and Wnt3a+TGF-ß) representing a total of 60 distinct genes. RNA was isolated from NMuMG cells treated with ligands for 2, 4, 8, or 16 h and was used to determine gene expression levels by quantitative PCR (Fig. 1D; Supplementary Table S2). Of 59 genes successfully amplified, 53 displayed
2-fold Wnt3a- and/or TGF-ßdependent regulation, representing a 90% validation rate. Consistent with the use of a 16-h ligand treatment for our microarray screen, many of the regulated genes displayed maximal activation at the 8 or 16 h time points. However, a few genes were induced early such as known direct targets of TGF-ß (Ctgf) and Wnt (Axin2; Fig. 1D; Supplementary Table S2). Our quantitative PCR analysis of gene expression in cells treated simultaneously with TGF-ß and Wnt3a revealed patterns consistent with the microarray data. Of particular interest, a number of genes were additively or cooperatively induced when both TGF-ß and Wnt3a were used together (Fig. 1D; Supplementary Table S2). Of note, several of these genes have been previously implicated as modulators (Gpc1, Cyr61, Mmp14) or components (Axin2, Inhba) of TGF-ß or Wnt pathways.
Cooperative activation of TGF-ß and Wnt target genes in colorectal cancer cells. Components of the Wnt and TGF-ß pathways are frequently mutated in human colon cancers. Thus, we next investigated whether cooperative TGF-ß/Wnt targets identified in NMuMG epithelial cells might also be cooperatively enhanced in colorectal cancer cells. As most, if not all, established colorectal cell lines harbor activating mutations affecting the Wnt pathway, we focused on examining the effect of TGF-ß in the responsive human colorectal line, LS1034, which harbors a mutation in APC. Transfection of LS1034 cells with the TOPFLASH reporter revealed a high level of basal luciferase activity that was abrogated in the presence of overexpressed APC or by a mutant version of the reporter lacking LEF/TCF binding sites (FOPFLASH), thereby confirming constitutive Wnt signaling in this line (Fig. 2A, left
). Furthermore, TGF-ßdependent activation of both the 3TP-lux and SBE-TOP reporters showed that LS1034 cells can respond to TGF-ß alone or in cooperation with the activated Wnt pathway to regulate target gene transcription (Fig. 2A, left). Consistent with this, a TGF-ßinduced increase in endogenous Smad7 and PAI-1 levels, two known TGF-ß target genes, was observed (Fig. 2A, right). Of 17 genes successfully amplified in LS1034 cells, incubation with TGF-ß increased transcript expression of 12 cooperative targets by
2-fold (Fig. 2A, right). Thus, TGF-ß can further stimulate the expression of 70% of cooperative target genes above the expression levels reached in the context of an activated Wnt/ß-catenin pathway. These results are consistent with the notion that TGF-ß and Wnt can cooperate to activate gene transcription in two epithelial cell systems, a mouse mammary epithelial line and a human colorectal cancer line.
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We next examined Wnt and TGF-ß pathway activation status in the mammary epithelium of MMTV-Wnt1 mice. These transgenic animals overexpress the Wnt1 oncogene in mammary epithelial cells leading to ductal hyperplasia during late embryogenesis and mammary adenocarcinomas in 50% of females by the age of 6 months (32). Staining of tissue sections from MMTV-Wnt1 mammary tumors revealed strong cytoplasmic ß-catenin staining in most ductal and alveolar epithelial cells, suggestive of active Wnt signaling (Fig. 2E). Extensive nuclear phospho-Smad2/3 staining was also evident in a large proportion of hyperplastic alveolar cells (Fig. 2E), indicative of an active TGF-ß/Smad pathway. Thus, these results suggest that both the Wnt/ß-catenin and TGF-ß/Smad pathways are fully activated in epithelial cells of Min intestinal adenomas and MMTV-Wnt1 mammary tumors, and may therefore cooperate to induce target genes in vivo.
Expression of TGF-ß and Wnt cooperatively induced genes in mouse models of Wnt/ß-catenininduced tumors. As the TGF-ß and Wnt pathways are both active in Min and MMTV-Wnt1 tumors, we next examined the expression of our cooperative target genes in these tissues. For intestinal adenomas, we used macroscopically dissected samples from Min mice. Of 18 genes examined, 13 displayed a
2-fold (P < 0.05) increase in expression in adenomas versus normal samples. The average increase in expression ranged from 4.7- to 43-fold, with the top seven most highly overexpressed genes being IL11, Robo1, Inhba, Ankrd1, Hs6st2, Mmp14, Gpc1, and Axin2 (Fig. 3, left
). Overexpression of Axin2 and Ccnd1 in Min adenomas is consistent with previous reports (27, 33).
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2-fold in tumors versus wild-type mammary glands. Ankrd1 and Gpc1 were the most highly overexpressed genes (14- and 7.5-fold, respectively). Nine genes, namely Ankrd1, Ccnd1, Ctgf, Gpc1, Hs6st2, IL11, Inhba, Mmp14, and Robo1, were significantly overexpressed in both Min and MMTV-Wnt1 tumor models. In summary, these results show that half of the genes identified as cooperatively induced genes in NMuMG cells show marked in vivo overexpression in Wnt/ß-catenininduced intestinal and mammary tumors. Epithelial and stromal overexpression of cooperative targets in Min adenomas. To confirm our quantitative PCR data, we did RNA in situ hybridization on a subset of genes in tumors from Min mice. As previously reported, Axin2 was highly expressed in Min adenomas (Fig. 4A ; ref. 27). Interestingly, Gpc1 and Robo1 showed similar expression patterns in adenomas, suggesting that these genes may be coregulated with Axin2 in adenomatous intestinal epithelial cells. Although we also identified Inhba as a TGF-ß/Wnt3a cooperative target in NMuMG epithelial cells, prominent Inhba expression was detected in stromal cells within and surrounding adenomas, but not in epithelial cells (Fig. 4B). Immunohistochemistry with an antibody specific to Activin A (Inhba homodimers) revealed that whereas Activin A marked the stromal compartment of normal small bowel and colon villi, this secreted factor was evident within both stromal and epithelial compartments of adenomas (Fig. 4B).
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Cooperative Wnt/TGF-ß targets in FAP adenomas and human cancers. Our previous data showed that Wnt/TGF-ß cooperative targets are overexpressed in intestinal adenomas of Min mice, a model for human FAP. We next investigated whether the same cooperative genes exhibited increased expression in eight human FAP samples using quantitative PCR. Consistent with previous studies (27), Axin2 was overexpressed in adenomas by an average 10.1-fold (P = 1.5 x 1010). Of nine Wnt/TGF-ß targets whose expression was increased in Min and MMTV-Wnt1 tumors, Ccnd1, Hs6st2, and Inhba were also significantly overexpressed in FAP tumors by
2-fold and had mean expression ratios of 2.2-fold (P = 0.0001), 2.7-fold (P = 0.002), and 3.2-fold (P = 0.003), respectively. We also analyzed the Inhba status by hybridization of a radiolabeled probe to a human cancer profiling array. Extensive overexpression of Inhba in colon cancers (average 3.3-fold), as well as cancers of the small intestine (3.0-fold), rectum (4.1-fold), and, to a weaker extent, in breast malignancies (2.4-fold; Fig. 6B
), was observed. Although our sample size is limited, these findings indicate that increased expression of TGF-ß/Wnt cooperative targets may also be involved in human cancer progression.
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| Discussion |
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Molecular alterations affecting TGF-ß and Wnt pathway components in human cancers and mouse tumor models have been widely reported (6). Activation of Wnt signaling is a feature of several human malignancies with most colorectal tumors harboring mutations in APC or ß-catenin (40). In contrast, for the TGF-ß pathway, mutations or epigenetic modifications that target the receptors or Smads lead to loss or attenuation of TGF-ßmediated growth inhibition. Although the selective loss of TGF-ßmediated growth inhibition favors progression of epithelial tumors, maintenance of other aspects of TGF-ß signaling enhances tumor invasion and metastasis (11). This suggests that an intact TGF-ß pathway integrates two opposing actions: a dominant activity that prevents tumor progression and another activity that favors it. This also implies that crosstalk events between a fully functional TGF-ß pathway and other tumor-initiating oncogenic pathways, such as Wnt, may set up a gene expression program that facilitates early tumor progression. Consistent with this possibility, we observed that in two mouse models of Wnt-induced tumors, Min and MMTV-Wnt1 mice, the Wnt/ß-catenin and TGF-ß/Smad pathways are active in tumor epithelial cells. The molecular pathology of distinct cancer types is quite diverse; however, we were particularly interested in genes cooperatively regulated by TGF-ß and Wnt in multiple tumor types, and our expression analysis showed that nine cooperative targets identified in tissue culture cells were also significantly overexpressed in both Min adenomas and MMTV-Wnt1 tumors. Furthermore, preliminary analysis in a small sampling of FAP patients revealed that four of these genes (Axin2, Ccnd1, Hs6st2, and Inhba) also show increased expression. Examination of a larger number of samples will be required to determine the extent of overexpression of our set of cooperative targets in FAP adenomas and whether these genes might contribute to tumor progression in other human cancers.
To directly assess the effect of TGF-ß signaling on Wnt1-induced tumors, we generated double-transgenic mice by crossing MMTV-Wnt1 to MMTV/DNIIR animals. The MMTV/DNIIR transgene alone does not delay ductal development, although it causes lobulo-alveolar development in virgin animals (41). Thus, the observed delay in tumor formation in the bigenic versus MMTV-Wnt1 mice is consistent with the model that endogenous TGF-ß signaling in mammary epithelial cells contributes to Wnt1-induced tumorigenesis. Concomitant with the increase in tumor latency in bigenic animals, we observed that at least three cooperative target genes, namely Gpc1, Inhba, and Robo1, show reduced expression levels in Wnt1/DNIIR tumors compared with those from Wnt1 animals. Although a few gene targets may be primary contributors to the TGF-ß effect in this model, we believe that a combinatorial effect on overall gene expression patterns is more likely responsible for the increase in tumor latency. In contrast to our study, in two other mammary tumor models, MMTV-TGF-
and MMTV-polyoma middle T antigeninduced tumors, decreased TGF-ß signaling has been shown to reduce rather than augment tumor latency (21, 42). Interestingly, although targeted deletion of one Smad4 allele was shown to increase tumor size in Min mice (43), specific deletion of Smad4 in T cells, but not in epithelial cells, leads to spontaneous epithelial cancers of the gastrointestinal tract (44). Together with our data, these observations suggest that the molecular basis for the dichotomous role of TGF-ß in tumorigenesis may not stem from TGF-ßonly initiated signals per se, but rather from the combinatorial effects of TGF-ß on gene expression patterns that occur in the context of distinct oncogenic pathways.
In our study, we examined cooperativity between TGF-ß and Wnt. However, Activin A, which is composed of an Inhba dimer, is a TGF-ß family member that also signals through Smad2/3 to activate TGF-ßlike signals. Thus, our identification of Inhba as a cooperative target is of particular interest. We showed that Inhba expression is increased in MMTV-Wnt1 and Min tumors, decreased in MMTV-Wnt1/DNIIR tumors, and overexpressed in human intestinal and breast malignancies. Thus, Activin is a candidate for a TGF-ß superfamily factor that cooperates with activated Wnt/ß-catenin pathway in tumor epithelial cells. Although Inhba is a Wnt/TGF-ß cooperative target in epithelial cells, in the Min mouse-derived adenomas, mRNA expression was detected primarily in the stromal compartment. On the other hand, secreted Activin A protein was abundant throughout the tumor. We postulate that persistent stimulation of tumor cells by Activin A produced by the stroma may establish a positive autoregulatory loop that induces Inhba transcription in tumor epithelial cells in late tumorigenesis. Consistent with this notion, overexpression of Inhba leading to overproduction of Activin A protein by epithelial tumor cells has been reported in stage IV colorectal cancer (45). A more widespread role for Inhba in neoplasia is also suggested by the observation that Inhba is overexpressed in a range of human tumors (4650).
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
We thank C. Silvestri for insightful comments and C. Ash and K. Boras-Granic for expert technical advice.
| Footnotes |
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L. Attisano is a Canada Research Chair.
5 X. Chytil, Y. Chen, and H.L. Moses, unpublished data. ![]()
6 http://www.mshri.on.ca/microarray/. ![]()
Received 7/11/06. Revised 10/ 7/06. Accepted 11/ 3/06.
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