| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Experimental Therapeutics, Molecular Targets, and Chemical Biology |
1 Lineberger Comprehensive Cancer Center, 2 Department of Biochemistry and Biophysics, and 3 Carolina Cardiovascular Biology Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina; 4 Departments of Medicine, 5 Surgery, and 6 Biochemistry and Molecular Biology, Indiana University School of Medicine; and 7 Walther Cancer Institute, Indianapolis, Indiana
Requests for reprints: Nancy Klauber-DeMore, MD 3010 Old Clinic Building, CB #7213, Chapel Hill, NC 27599. Phone: 919-966-8007; Fax: 919-966-8806; E-mail: nancy_demore{at}med.unc.edu.
| Abstract |
|---|
|
|
|---|
| Introduction |
|---|
|
|
|---|
or ß agonist, and its antiproliferative and apoptotic activities (57) are independent of the interaction with those receptors (8). The antiangiogenic activity of 2ME2 is, at least in part, mediated through down-regulation of hypoxia-inducible factor-1
, which inhibits hypoxia-inducible factor-1induced transcriptional activation of vascular endothelial growth factor expression (9). Inhibition of hypoxia-inducible factor-1 takes place downstream of the 2ME2/tubulin interaction, as disruption of interphase microtubules is necessary for hypoxia-inducible factor-1
down-regulation (9). 2ME2 causes cell cycle arrest at G2-M (1012), and it has been proposed that cell cycle arrest is mediated by the ability of 2ME2 to bind to the colchicine binding site of tubulin with impairment of spindle formation (11, 13); however, this finding has been disputed (10) and the process by which 2ME2 inhibits tumor growth is still not well understood.
Here we report further insight into the mechanism of cell cycle regulation by 2ME2 through inhibition of the anaphase-promoting complex (APC), a ubiquitin ligase of which the activation is required for separation of sister chromatids, which are the the target of the mitotic spindle assembly checkpoint. We also describe the identification of a novel mechanism of 2ME2-induced inhibition of protein translation via a tubulin-independent pathway.
| Materials and Methods |
|---|
|
|
|---|
To determine the IC50 value for 2ME2, cell proliferation assays were done in the following manner: MDA-MB-435, P435, and 2ME2R cells (20,000 per well) were plated in a 24-well plate and incubated for 24 h in the absence of 2ME2. 2ME2 [Sigma (St. Louis, MO) or EntreMed, Inc. (Rockville, MD)] was suspended in DMSO and serially diluted in media to make final concentrations ranging from 0.05 to 200 µmol/L. The final DMSO concentration was <1% by volume. The drug mixtures or solvent alone was added to each well 24 h after being seeded. Control wells for 2ME2 contained 1% DMSO by volume. After 48 h, cells were trypsinized and counted using a hemocytometer. The readings obtained for each concentration tested are from averages of three wells. Each experiment is expressed as a percentage of control, and the results are averages of at least three experiments. IC50 values were determined from dose-response curves using GraphPad Prism (San Diego, CA).
Cell culture and RNA extraction. MDA-MB-435 was plated (2.5 x 106 cells) in 75-cm2 flasks or 100-mm plates in DMEM with 10% fetal bovine serum and 100 units of penicillin-streptomycin (Life Technologies). After 24 h, the medium was changed and cells were cultured with 2ME2 (2 µmol/L) or 1% DMSO by volume. After 48 h, total RNA was extracted using the Qiagen RNeasy Kit and purified with QIAquick PCR Purification Kit (Qiagen, Germantown, MD). The integrity and relative contamination of mRNA with rRNA were tested using the RNA 6000 Nano LabChip (Agilent Technologies, Santa Clara, CA) and Agilent 2100 bioanalyzer (Agilent Technologies). Technical replicates were done four times each to give a significant level of confidence for the average experimental-to-control intensity ratio for each gene.
cDNA synthesis and microarray hybridization. RNA from cells was reverse transcribed into cDNA labeled with Cy5-dUTP (Amersham Biosciences, Buckinghamshire, England) and into Cy3-labeled common reference sample that is a modified version of the Stratagene Human Universal (15) as previously described (16). Microarray hybridizations were done using 22k Agilent Human oligonucleotide microarrays. After hybridization, the arrays were scanned with Axon Gene Pix 4000 scanner (Axon Instruments, Inc., Foster City, CA). The images were analyzed using Gene Pix Pro 6.0 software (Axon Instruments).
Data normalization, preprocessing, and statistics. Gene expression values were quantified by the log 2 ratio of red channel intensity versus green channel intensity, followed by LOWESS normalization to remove the intensity-dependent dye bias and variation (17). UNC Microarray database8 was used for filtering and preprocessing.9 A two-class Significance Analysis of Microarrays (SAM10; refs. 18, 19) was done to identify significantly differentially expressed genes between arrays from treated and control cells.
To interpret the gene lists derived from the results of SAM and to convert the gene list into biological themes, we applied the Expression Analysis Systematic Explorer (EASE)11 analysis. If genes in a biological category are significantly enriched in the SAM-derived gene list, then that biological category may be involved in the biological system. EASE can assign a score to quantify how much confidence we have about the discovery.
Cell cycle analysis by flow cytometry. Cell cycle analysis was done as previously described (20). Briefly, cells (2 x 105) were plated on a 60-mm plate, harvested by trypsinization, pelleted, and resuspended in 1 mL of PBS. After spinning, RNase A was added (final concentration, 2 mg/mL). Cells were further stained with 50 µg/mL propidium iodide solution. Cell cycle analysis was carried out with a Becton Dickinson (Bedford, MA) FACScan flow cytometer. Data were analyzed with the Modfit LT software (Verity Software House, Inc., Topsham, ME).
Apoptosis. The carboxyfluorescein FLICA apoptosis detection kit (Immunohistochemistry Technologies, LLC, Bloomington, MN) was used to measure typical apoptosis, atypical apoptosis, and necrosis (21). Briefly, 2 x 105 cells were grown overnight on a 60-mm plate and treated with 2ME2 (1 and 5 µmol/L) for 24 or 48 h. Both attached and floating cells were collected by trypsinization and incubated with carboxyfluorescein-labeled pan-caspase inhibitor FAM-VAD-fmk for 2 h at 37°C. Labeled cells were rinsed twice in PBS and resuspended in 300 µL of PBS containing 0.3 µg of propidium iodide. Apoptotic cells were identified by FACScan analysis as previously described (21). All apoptosis assays were done thrice and representative data are presented.
Cell-surface staining for cyclin B1. Surface staining for cyclin B1 was done according to the manufacturer's instructions (fluorescein-FITC-conjugated cyclin B1 antibody reagent set, BD PharMingen, San Diego, CA). Briefly, cells were washed with PBS, adjusted to 106 cells per sample, and incubated with either FITC-conjugated mouse immunoglobulin G (IgG) as a control or cyclin B1 for 30 min at room temperature. Analysis was done by using the CellQuest software.
Western blotting. P435 or 2ME2R cells were seeded in T75 culture flasks in the absence of 2ME2. After 24 h, the medium was then replaced with a new medium containing either vehicle (0.1% DMSO) or 5 µmol/L 2ME2 for 16, 24, or 48 h at 37°C. Whole-cell lysates were prepared by suspending the cells in lysis buffer (8 mol/L urea, 4% CHAPS, 15 mmol/L Tris-HCl) containing protease inhibitor cocktail (Roche, Nutley, NJ) and then briefly sonicated. Proteins (40 µg/lane) were resolved by 4% to 12% SDS-PAGE and electrotransferred to a polyvinylidene difluoride membrane. The membrane was then incubated with the securin primary rabbit antibody (4 µg/mL; Zymed Laboratories, San Francisco, CA), followed by securin secondary goat anti-rabbit horseradish peroxidase (HRP)conjugated antibody (1:10,000; Chemicon International, Temecula, CA) or glyceraldehyde-3-phosphate dehydrogenase (GAPDH) primary mouse antibody (1:5,000; Chemicon International), and then by GAPDH secondary sheep anti-mouse HRP-conjugated antibody (1:10,000; Amersham Biosciences), and finally electrochemiluminescence detection was done. Proteins were normalized on GAPDH expression in the same lane. Relative absorbances (arbitrary units) were normalized against those of each control group. Results are expressed as the mean ± SE. Statistical analysis was done using a one-tailed unpaired t test, and P < 0.05 was considered significant.
Antibodies against cyclin B1 and cdc2 were purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA). Antibodies against phospho-cdc2 (Thr161 and Tyr15) and phospho-Bcl-2 were from Cell Signaling Technology (Danvers, MA). Phospho-Bcl-2 and total Bcl-2 were from BD PharMingen. All the primary antibodies were used at 1:1,000 dilution. Secondary antibodies against rabbit were used at 1:10,000 whereas secondary antibodies against mouse were used at 1:2,000 (Amersham, Piscataway, NJ).
APC ubiquitination assay. Ubiquitination assays were carried out as described (22). The substrate Clb2 (pRSETClb2), the coactivator Cdh1 (pET28-His6-Cdh1), and the E2 Ubc4 (pET28-His6-Ubc4) were prepared using the TNT T7 Quick coupled in vitro transcription/translation kit (Promega, Madison, WI). APC (YKA156) was purified from budding yeast (W303 background) arrested in late M phase and
0.1 pmol was used in each reaction. For APC purification, cells from the strain YKA156 (MATa bar1::URA3 cdc15-2 ura3 leu2 trp1 CDC27-3FLAG::KanMX4) were arrested in late M phase during mid-log phase growth. Late M phase arrest was achieved by shifting YKA156 cultures (cdc15-2 allele) from 25°C (permissive) to 37°C (restrictive). Cells were lysed in 1 volume of APC-C lysis buffer [25 mmol/L HEPES-NaOH (pH 7.5), 400 mmol/L NaCl, 10% glycerol, 0.1% Triton X-100, 0.1 mmol/L DTT, 0.5 mmol/L phenylmethylsulfonyl fluoride (PMSF), and complete protease inhibitor cocktail (Roche)] by vortexing for 45 min at 4°C in 1.7-mL microcentrifuge tubes containing 0.5 mL of 0.5-mm glass beads (23). Cell lysate was cleared by centrifugation at 16,000 x g for 15 min. Soluble extracts were pooled and cleared a second time at 5,000 rpm for 5 min. Extracts were incubated with EZView anti-FLAG M2 antibody-coupled resin (Sigma) for 1.5 h at 4°C, washed extensively with APC-C buffer, and eluted with FLAG peptide (250 µg/mL) in low-salt APC-C buffer [25 mmol/L HEPES-NaOH (pH 7.5), 150 mmol/L NaCl, 10% glycerol, 0.1% Triton X-100, 0.1 mmol/L DTT, z0.5 mmol/L PMSF]. Clb2 was radiolabeled with [35S]methionine (Perkin-Elmer, Wellesley, CA). Stock solutions (20x) of 2ME2 were used and final concentrations in each reaction were as noted. Reactions were run on a 4% to 12% Bis-Tris NuPAGE gel (Invitrogen), dried, and imaged using Hyperfilm (Amersham Biosciences).
Protein translation assay. MDA-MB-435 and 2ME2R cells were seeded in T75 culture flasks. After 24 h, the medium was replaced with new medium containing either 2ME2 (2 µmol/L) or vehicle (DMSO) alone and was then treated for a period of 48 h. Cells were suspended in pulse media containing DMEM/MG132 (20 µmol/L)/[35S]methionine (250 µCi/100 µL) with either 2ME2 or vehicle alone. The cell suspensions were incubated in a water bath at 37°C for periods of 5, 10, 15, and 30 min. Immediately after briefly vortexing, equal aliquots were then taken at each time point. Isotope incorporation was then stopped by placing each aliquot in 10x volume of ice-cold PBS containing 1 mg/mL methionine. Cells were pelleted and resuspended in lysis buffer (50 mmol/L Tris-HCl, 150 mmol/L NaCl, 1 mmol/L EDTA, 1% Triton X-100) containing proteinase inhibitor cocktail (Roche). Cells were then lysed on ice for 30 min, with vortexing every 10 min. The lysates were then spun at 16,000 x g for 15 min to pellet the insoluble fraction. Equal volumes of the soluble fraction were resolved using 4% to 12% SDS-PAGE. Gels were then fixed, dried, and quantitated with PhosphorImager (Molecular Dynamics, Sunnyvale, CA).
| Results |
|---|
|
|
|---|
Identification of treatment response genes using cDNA microarrays. Gene expression was studied in MDA-MB-435 human breast cancer cells with and without the addition of 2ME2 (2 µmol/L) using human 22k Agilent microarrays. Using SAM, there was differential expression in 264 genes, of which 135 were up-regulated and 129 were down-regulated (Supplementary data). When categorized by function with EASE, there were changes in expression of genes involved in six Gene Ontology categories (Fig. 1A ). We further investigated three of the Gene Ontology categories, cell cycle (Fig. 1B, i), apoptosis (Fig. 1B, ii), and cytosolic ribosome (Fig. 1B, iii), and evaluated whether their mechanisms were tubulin dependent.
|
|
|
|
|
2ME2 does not directly bind to the APC. To elucidate whether 2ME2 is directly binding to and inhibiting the APC, we evaluated the effect of 2ME2 on the APC in an APC ubiquitination assay. In this assay, the APC is isolated from yeast and incubated with coactivator Cdh1 and substrate Clb2, and, as a result, Clb2 is ubiquitinated. We found that the addition of 2ME2 did not inhibit ubiquitination of the substrate Clb2 (Supplementary data), which shows that 2ME2 does not directly bind to and inhibit the APC.
2ME2 inhibits protein translation. We next evaluated the effect of 2ME2 on protein translation because gene expression in the cytosolic ribosome category was decreased in response to 2ME2. We measured protein translation in MDA-MB-435 cells after incubation with 2ME2 (2 µmol/L) for 48 h, using a pulse assay measuring [35S]methionine incorporation. We found a 25% decrease in the percentage increase of isotope incorporation in 2ME2-treated cells (P = 0.01; Fig. 6A and B ). To determine whether inhibition of protein translation by 2ME2 was tubulin dependent, we next treated 2ME2R cells with 2ME2 (2 µmol/L) for 48 h and used a pulse assay. We found a 52% decrease in the percentage increase of isotope incorporation in 2ME2-treated cells (P = 0.02; Fig. 6C and D), showing that 2ME2 inhibits protein translation in a tubulin-independent manner.
|
| Discussion |
|---|
|
|
|---|
In the present study, we first sought to identify potential targets that were differentially regulated in response to 2ME2. Using long oligo-spotted microarrays, we found the cell cycle, apoptosis, and cytosolic ribosome Gene Ontology categories differentially expressed in 2ME2-treated MDA-MB-435 cells. Using a stable 2ME2-resistant cell line (2ME2R), we further explored whether these functions are tubulin dependent or not.
We have previously shown that this cell line derived from parental MDA-MB-435 (P435) has two acquired point mutations in the class I (M40) ß-tubulin both at the DNA and protein levels (14). Immunofluorescence and in vitro polymerization assays showed that 2ME2-driven tubulin depolymerization is impaired in 2ME2R cells (14).
We studied 2ME2-mediated cell cycle events in this 2ME2R cell line and delineated tubulin-dependent versus tubulin-independent effects of 2ME2. We found that treatment of P435 with 2ME2 led to an accumulation of cells at G2-M, but no major G2-M arrest was seen in 2ME2R cells. We also found that P435 cells underwent apoptosis in a time-dependent manner in response to 2ME2, whereas 2ME2R cells did not undergo apoptosis when treated with 2ME2. Furthermore, we observed phosphorylation of Bcl-2 protein only in P435 cells, consistent with an earlier report (25). These data strongly suggest that regulation of cell cycle and apoptosis by 2ME2 is tubulin dependent.
Cell cyclerelated genes that were increased in 2ME2-treated MDA-MB-435 cells included MAD2, BUB1, and CDC20, which are involved in the mitotic spindle assembly checkpoint. Cell cycle progression is monitored by the mitotic spindle assembly checkpoint, which monitors that all chromosomes have achieved bivalent attachment to microtubules (27). The target of the checkpoint control is the APC, a ubiquitin ligase of which the activation is required for separation of sister chromatids. Formation of MAD-BUB complexes is crucial for the checkpoint mechanism (27, 28). On activation of the mitotic spindle assembly checkpoint, MAD2 binds to and inhibits the APC, causing a metaphase arrest and preventing securin and cyclin B1 proteolysis by blocking its ubiquitination, which is critical in controlling the metaphase-anaphase transition (24, 27).
We found that securin and cyclin B1 proteins were increased in 2ME2-treated P435 cells, suggesting that the APC is inhibited. In contrast, we found that cyclin B1 was not increased in 2ME2R cells, and the increase in securin was attenuated in 2ME2R cells. Furthermore, using flow cytometry, we found that cyclin B1 levels were increased at G2-M in 2ME2-treated P435 cells, but not in resistant 2ME2R cells. This suggests that 2ME2 inhibits APC in a tubulin-dependent manner.
Progression of prophase to metaphase is controlled by activation of the cdc2/cyclin B1 complex (29). Cdc2 (or p34cdc2), a G2-M regulatory protein that controls entrance to and exit from M-phase, is activated in P435 cells. Phosphorylation status of cdc2 showed that phosphorylation of Thr161 representing the active form was increased in response to 2ME2 treatment in P435 cells but not in 2ME2R cells, whereas phosphorylation of Tyr15 (inactive form) was decreased. This suggests that P435 cells had entered metaphase. However, further entry into the anaphase depends on the destruction of cyclin B1/cdc2 activity by APC. Based on the up-regulation of cyclin B1 and activation of cdc2, P435 cells were arrested at metaphase. Taken together, these results suggest that the presence of tubulin mutations in 2ME2R cells may affect the association of cyclin B1/cdc2 complex with the microtubules via inhibition of the APC, resulting in altered cell cycle response in 2ME2R.
To exclude the possibility that 2ME2 is directly binding to and inhibiting the APC, we evaluated the direct effect of 2ME2 on the APC in an APC ubiquitination assay. We found that the addition of 2ME2 in this assay did not inhibit ubiquitination of the substrate Clb2, which shows that 2ME2 does not directly bind to and inhibit the APC.
Genes in the cytosolic ribosome category, which are responsible for the formation of the ribonucleoprotein complex, were significantly decreased in 2ME2-treated cells, and therefore we hypothesized that 2ME2 inhibits protein translation. In numerous cancers, general protein synthesis rates and the expression of several translation components are significantly elevated, supporting the potential importance of translational control in tumor progression (30). Using a [35S]methionine pulse assay, we found an inhibition of protein translation in 2ME2-treated MDA-MB-435 cells. We also found that 2ME2 significantly inhibited protein translation in 2ME2R cells, showing that inhibition of protein translation by 2ME2 acts via a tubulin-independent pathway. Because 2ME2R cells are highly resistant to 2ME2, yet 2ME2 significantly inhibited protein translation, this suggests that the effects on protein translation are not important to the antimitotic effect of 2ME2.
In conclusion, our data suggest that the cell cycle, apoptotic, and APC regulatory effects of 2ME2 are tubulin dependent. These mechanisms are important aspects of the antimitotic effect of 2ME2, as they were diminished in a highly 2ME2-resistant cell line. We also discovered a novel mechanism of action of 2ME2: inhibition of protein translation by decreasing expression of genes involved in the formation of the ribonucleic protein complex via a tubulin-independent mechanism. Protein translation inhibition was maintained in a highly 2ME2-resistant cell line, and therefore this mechanism does not contribute to the antiproliferative effect of 2ME2. Whether this contributes to antitumor activity in vivo requires further investigation.
| Acknowledgments |
|---|
The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
We thank Dr. Theresa LaVallee for advice about experimental procedures, EntreMed for supplying the drug, and the Indiana University Flow Cytometry Facility.
| Footnotes |
|---|
Conflict of interest: Dr. George Sledge is a paid consultant for EntreMed, Inc.
9 Data associated with this study are available at http://genome.unc.edu/pubsup/breastTumor/. ![]()
10 http://www-stat.stanford.edu/~tibs/SAM/. ![]()
11 http://david.niaid.nih.gov/david/ease.htm. ![]()
Received 9/15/06. Revised 10/31/06. Accepted 11/10/06.
| References |
|---|
|
|
|---|
and ß. Cancer Res 2002;62:36917.
B inhibitor sesquiterpene parthenolide induces concurrently atypical apoptosis and cell necrosis: difficulties in identification of dead cells in such cultures. Cytometry A 2003;54:11824.[CrossRef][Medline]This article has been cited by other articles:
![]() |
M. Ganapathy, R. Ghosh, X. Jianping, X. Zhang, R. Bedolla, J. Schoolfield, I-T. Yeh, D. A. Troyer, A. F. Olumi, and A. P. Kumar Involvement of FLIP in 2-Methoxyestradiol-Induced Tumor Regression in Transgenic Adenocarcinoma of Mouse Prostate Model Clin. Cancer Res., March 1, 2009; 15(5): 1601 - 1611. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. Y.E. Liaw, N. K. Salam, M. J. McKay, A. M. Cunningham, D. E. Hibbs, and M. Kavallaris Class I {beta}-tubulin mutations in 2-methoxyestradiol-resistant acute lymphoblastic leukemia cells: implications for drug-target interactions Mol. Cancer Ther., October 1, 2008; 7(10): 3150 - 3159. [Abstract] [Full Text] [PDF] |
||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| Cancer Research | Clinical Cancer Research |
| Cancer Epidemiology Biomarkers & Prevention | Molecular Cancer Therapeutics |
| Molecular Cancer Research | Cancer Prevention Research |
| Cancer Prevention Journals Portal | Cancer Reviews Online |
| Annual Meeting Education Book | Meeting Abstracts Online |