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Cell, Tumor, and Stem Cell Biology |
P5' Thio-Phosphoramidate Targeting Telomerase
Departments of 1 Cell Biology and 2 Pharmacology and 3 Harold Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, Texas; 4 Department of Biochemistry, Faculty of Medicine, University of Hacettepe, Ankara, Turkey; and 5 Geron Corporation, Menlo Park, California
Requests for reprints: Jerry W. Shay, Department of Cell Biology, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9039. Phone: 214-648-3282; Fax: 214-648-8694; E-mail: jerry.shay{at}utsouthwestern.edu.
| Abstract |
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| Introduction |
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A new class of oligonucleotide telomerase inhibitors that target the hTR component of telomerase has been developed recently (12). GRN163, a N3'
P5' thio-phosphoramidate, causes reversible telomerase inhibition and subsequent telomere shortening in many cell types, including human mammary epithelial cells (13). Importantly, GRN163 is not a typical antisense oligonucleotide targeting mRNA. Because it is a direct enzymatic inhibitor at the hTR active site, RNase H is not required and a 50% inhibition of target can lead to telomere dysfunction (14). GRN163-induced telomere erosion also causes the induction of senescence or apoptosis in prostate cancer, multiple myeloma, and non-Hodgkins lymphoma cells as well as a reduction of tumor growth in myeloma and glioblastoma xenograft models (1517). It has been reported that telomerase has multiple functions besides maintenance of telomeres, which may have some bearing on the observations that GRN163L induces senescence or apoptosis in addition to telomere erosion (18).
As with most anionic oligonucleotides, repeated transfection of GRN163 with cationic lipophilic carriers was required for efficient intracellular uptake because naked oligonucleotides are relatively poorly internalized (1924). Thus, we synthesized a second generation of GRN163 that contained a 5'-terminal palmitoyl (C16) moiety conjugated to the thio-phosphoramidate backbone of GRN163 and designated it as GRN163L (19). The lipidation of GRN163 greatly increased the intracellular uptake, inhibition of telomerase, rate of telomere shortening, growth inhibition, and apoptosis in human mammary epithelial and hepatoma cell lines (1921).
Of particular interest was the observation that within only 1 to 2 weeks of treatment with GRN163L, A549 lung cancer and MDA-MB-435 breast cancer cells exhibited reductions in clonal efficiency, loss of anchorage-dependent growth capabilities, and decreased invasiveness (21, 22). These changes in cell behavior were much too rapid to be caused by progressive telomere shortening, which previous researchers have found with the parental GRN163. Indeed, our earlier results indicate that critical telomere shortening in cell culture in the A549 and MDA-MB-435 cell lines required 6 to 8 weeks of continuous treatment with GRN163L (21, 22). However, after 1 day of GRN163L treatment, A459 cells exhibited morphologic alterations, suggesting changes in cellular adhesion (22).
In this report, we characterize the antiadhesive effects of GRN163L in vitro and in vivo. We show that the morphologic changes induced by GRN163L are independent of hTR expression, independent of telomerase holoenzyme inhibition, and unrelated to the telomere length of cancer cells. The rapid morphologic alterations are related to a dysfunction in cell adhesion induced by GRN163L, manifested by a reduction in both the strength of cellular attachment and the total cell spreading surface area. We also report that in vivo i.p. administration of a single dose of GRN163L (15 mg/kg) at the time of cell inoculation results in a reduction in A549-luciferase (A549-luc) lung cancer metastasis. This suggests that the antimetastatic effect of GRN163L on A549 cells may be related, in part, to the anticell adhesive effects of this novel cancer therapeutic. These findings represent an unanticipated mechanism of action for GRN163L, which may open new avenues for therapeutic treatments.
| Materials and Methods |
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For morphologic analyses, 0 x 105 to 3 x 105 cells in 10 mL medium were seeded into 10-cm2 culture dishes and 1 µmol/L mismatch or 1 µmol/L GRN163L was added directly to the dish before cell attachment. Phase-contrast micrographs were taken using an inverted Zeiss Axiovert 200M at x20 magnification (Carl Zeiss-Thornwood, NY).
Synthesis of oligodeoxynucleotides. All oligonucleotides, except the shorter versions of GRN163L, were synthesized as described previously (15). Truncated versions of GRN163L (11, 9, and 7 mer) were purchased from Transgenomic, Inc. (Omaha, NE). The prepared oligonucleotides were solubilized in normal saline and their concentrations were determined by UV spectroscopy.
Telomerase activity assay. Telomerase activity from cell extracts was analyzed using the PCR-based telomeric repeat amplification protocol (TRAP) assay (1). Samples were resolved by PAGE and scanned using a Storm 860 PhosphorImager scanner system (Molecular Dynamics, GE Healthcare, Piscataway, NJ). Quantitation and visualization of the TRAP gels were as described (21, 22).
Generation of adenoviral hTERT-A549-luc cells. A549-luc cells (70% confluent) were exposed to adenoviral hTERT (AdhTERT; multiplicity of infection of 30) for 16 h in medium without serum. The virus was then removed and complete medium was then added. Transfection frequency was
75% after 24 h.
Immunofluorescence. A549-luc and A549-luc-AdhTERT cells (1 x 104/300 µL medium) were seeded into eight-well chamber slides and allowed to attach overnight. Then, the cells were fixed in 4% PAF, permeabilized with 0.1% Triton X-100, and blocked with 0.5% bovine serum albumin (BSA). The slides were incubated with antimouse hTERT antibody (1A4; 5 µg/mL) produced at Geron Corp. (Menlo Park, CA) and rhodamine-conjugated goat anti-mouse IgG (Jackson ImmunoResearch Laboratory, Inc., West Grove, PA), then mounted with Vectoshield + 4',6-diamidino-2-phenylindole (Vector Laboratories, Inc., Burlingame, CA), and viewed using a Zeiss Axiovert 200M microscope. All original pictures were taken using a magnification of x20.
hTR reverse transcription-PCR. Total cellular RNA was extracted from cultured cells using RNeasy Mini kit (Qiagen, Valencia, CA) according to the manufacturer's instructions. Reverse transcription-PCR (RT-PCR) was done using a one-step RT-PCR kit (Invitrogen) with hTR primers: 5'-TCTAACCCTAACTGAGAAGGGCGTAG-3' (F3B-hTR) and 5'-CCAGCAGCTGACATTTTTTG-3' (Htr189R; ref. 25). As internal controls for the quantity and quality of the RNA specimens, RT-PCR amplifications targeting transcripts of the housekeeping gene glyceraldehyde-3-phosphate dehydrogenase were done in parallel.
Cell attachment and spreading assays. Cell attachment and spreading were carried out following the methodology described in Current Protocols in Cell Biology (Cell Substrate Adhesion Assays 9.1).6 Briefly, wells in a 96-well plate (Nalge Nunc, Rochester, NY) were coated overnight at 4°C with Dulbecco's PBS (DPBS) or type I collagen (125 µg/mL; BD Biosciences, San Jose, CA). Free collagen was aspirated and wells were blocked with HI-BSA (10 mg/mL) overnight at 4°C. Wells were washed with DPBS. A549-luc cells were trypsinized briefly and detached quickly. Cells (1 x 105/mL for spreading and 1 x 106/mL for attachment) were resuspended gently in CO2-conditioned medium [DMEM-HEPES-10% fetal bovine serum gassed with 5% (v/v) CO2 for 2030 min]. Care was taken to guard against cell clumping and aggregation. Cells in conditioned medium were placed in 50 mL tubes in incubators (5% CO2 at 37°C) uncovered for 10 to 15 min to allow for the recovery from trypsinization and the reexpression of cell surface molecules that mediate cell attachment and spreading. Mismatch or GRN163L was diluted with DPBS and the diluted oligonucleotides were added to the 96-well plate, and then 5 x 103 cells for spreading and 5 x 104 cells for attachment were added to the wells.
For attachment assays, cells (in triplicate) were incubated with oligonucleotides for 20 min at 37°C. Cells were washed, which removed some weakly adherent cells, and fixed with 5% glutaraldehyde for 20 min at room temperature. The fixed cells were stained with filtered 0.1% crystal violet diluted in 200 mmol/L MES (pH 6) for 1 h at room temperature. The dye was solubilized in 10% acetic acid for 15 min on an orbital shaker. Absorbance was measured at 570 nm using a microtiter plate reader. Data are expressed as relative attachment, which is equivalent to absorbance. For spreading assays, conditioned cells were incubated with test oligonucleotides for 90 min at 37°C. Media were aspirated and cells were fixed directly with 5% glutaraldehyde for 30 min room temperature. Fixative was aspirated and cells were stored at 4°C in CMF-DPBS-NaN3. Cells were viewed on an inverted phase-contrast microscope at x63, oil using a Zeiss Axiovert 200M. Total cell surface area was quantified with Axio-Vision (Carl Zeiss MicroImaging Thornwood, NY).
Xenograft mice experiments and bioluminescence in vivo imaging of A549-luc cells. Immunodeficient mice (nu/nu; Harlan Sprague Dawley, Inc., Indianapolis, IN) were maintained in pathogen-free conditions within the Animal Research Committee (ARC) at the University of Texas Southwestern Medical Center and treated according to ARC and Animal Care and Use Committee guidelines. Mice were irradiated with 3.5 Gy 137Cs 18 to 24 h before tail vein injections with A549-luc cells. The cell viability was checked via trypan blue exclusion and 1 x 106 cells/200 µL NaCl (0.9%) were injected into the tail vein of four mice per group. Immediately after cell inoculation, mice were given a single dose of either mismatch (15 mg/kg) or GRN163L i.p. Mice were imaged weekly using a novel light emission tomography system as described previously (21, 22). All images were taken for 10 min. Signal intensity was quantified as the sum of all detected photon counts within the region of interest after subtraction of background luminescence using Igor Pro software.
| Results |
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The alteration in cell adhesion in the 163L-treated cells, attributed above to an inhibition of cell spreading, is documented in Fig. 4C. A549-luc cells treated before cell attachment (preattachment panels) with a single dose of 1 µmol/L GRN163L have incomplete cytoplasmic protrusions coupled with retarded cell flattening after 90 min of incubation, whereas cells treated with 1 µmol/L mismatch control appear well spread with numerous lamellipodia. Cells that were treated preattachment, but were seeded into wells coated with type I collagen (25 µg/mL), did not exhibit any differences in the ability to spread and flatten out when compared with mismatch controltreated cells. Quantitatively (Fig. 4D), the 57% reduction in total cell surface area of 163L compared with mismatch-treated cells was abolished in collagen-coated wells (Fig. 4B and D). Thus, type I collagen blocks the GRN163L-induced reduction of cell spreading. Importantly, A549-luc cells that were allowed to attach to the plastic substrata for 1 h were less resistant to 163L because there was only a 22% reduction in cell spreading between the mismatch- and 163L-treated cells (Fig. 4C and D, right).
Determination of the key molecular components of GRN163L which confer the antiadhesive effect. To dissect the important antiadhesive features of GRN163L, we designed and tested several other oligonucleotides that were similar in structure but contain specific modifications in the lipid moiety, backbone chemistry, or G-rich motif. Data shown in Table 1 were collected using 1 µmol/L of the oligonucleotides added before plating the cells in plates. Altered adhesion strength (rounding) was determined after 24 h and TRAP inhibition was measured 72 h after oligonucleotide addition.
We predicted that the most important structural component involved in the antiadhesive effect of 163L was the lipidation of the compound because lipidation plays a key role for bioavailability. We observed that the unlipidated parental GRN163 does not alter cell adhesion (Table 1). These data indicate that the potential molecular target may be intracellular. In addition, if the palmitoyl group is substituted for lipids with different structures, such as "teflon" or cholesterol, cell adhesion is reduced because there were inactive at 1 µmol/L but showed effects at 10 µmol/L (data not shown).
We also hypothesized that the nitrogen-phosphorous-sulfurcontaining backbone chemistry (NPS linkage) might be important in the anticell adhesion induced by 163L. Our data show that oligonucleotides that have alternative backbone chemistries (oligonucleotides 1 and 2; i.e, phosphoramidate oligonucleotides) did not alter cell adhesion, suggesting that the thio-containing backbone chemistry in 163L is an important factor in impeding cell adhesion.
Because the mismatch control differs from 163L only by the lack of three contiguous guanine residues, it seemed that this motif might also be necessary for the altered cell adhesion phenotype. The data collected using the truncated versions of 163L (11, 9, and 7 mer), which retain the triple-G motif, are consistent with this concept. All of these shortened derivatives of 163L alter cell adhesion to the same extent as the full-length 163L-13mer. This hypothesis is further supported by the fact that oligonucleotides 3 and 4, which lack the triple-G motif, do not alter A549 cell adhesion.
Thus, it seems that the combination of lipophilicity conferred by the palmitic group, the thio-containing backbone chemistry, and the triple-G motif all contribute to making GRN163L an antiadhesive agent. This is best exemplified by oligonucleotides 5 and 6, which contain the three aforementioned molecular determinants and subsequently alter adhesion with no effect on telomerase inhibition; further distinguishing the antiadhesive mechanisms from the telomerase inhibitory effects.
A single dose of GRN163L given in vivo reduces A549-luc cell metastasis to the lung. A human xenograft model of lung cancer metastasis was used to determine the effect of a single i.p. dose of GRN163L (15 mg/kg) given at the time of i.v. A549-luc lung cancer cell inoculation in athymic nude mice. We found that a single dose of GRN163L (15 mg/kg) resulted in a 92%, 76%, and 53% reduction in tumor load at days 13, 20, and 27, as determined by bioluminescent imaging (of luciferase-expressing A549 cells) of GRN163L versus mismatch-treated (15 mg/kg) controls (Fig. 5 ). Because reductions in A549-luc cell attachment and spreading were found in vitro (Fig. 4), one interpretation of these finding is that the antiadhesive effects of GRN163L may be related, at least in part, to the reductions in lung tumor burden found in vivo in this experimental model of metastasis.
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| Discussion |
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P5' thio-phosphoramidate GRN163L, which is a promising anticancer compound (1924, 26). We have shown previously that this hTR antagonist efficiently inhibits telomerase, which culminates in a reduction of several transformed and metastatic phenotypes in vitro and in vivo (19, 21, 22). The ability of GRN163L to act as an anticancer agent, before this report, was believed to be mediated by inhibiting telomerase via direct interaction with the hTR. The results from our present study show a previously uncharacterized antiadhesive effect of GRN163L, which may represent a novel antimetastatic mechanism of action for this compound. Most importantly, we hypothesize that the reduction in A549 lung metastases in GRN163L-treated mice is at least a partial in vivo manifestation of the decreased adhesiveness of the A549 cells that we observe in vitro. Furthermore, these rapid morphologic changes induced by GRN163L were independent of its known telomerase inhibitory effect via hTR antagonism. We used two different ALT (telomerase independent) cell lines (SUSM-1 and VA13) that completely lack hTR RNA expression to show that even in the total absence of hTR expression, GRN163L still alters cell morphology (Fig. 2A). This observation also suggests that the anticell adhesive effects of GRN163L may be effective against ALT tumors.
We rationalized that the phenotypic changes in morphology induced by GRN163L were a result of altered cell adhesion. Cell adhesion can be viewed as an intricately orchestrated two-step process (i.e., initial attachment to the substratum and subsequent cell spreading). We found that the changes in cell morphology were prevalent only if the A549-luc cells were treated within the first few hours of cell attachment. If cells were allowed to firmly attach to plastic substrata overnight, they were resistant to the reduced cell attachment and spreading induced by GRN163L (Fig. 4).
Several reports suggest that oligonucleotides with other chemistries (e.g., phosphorothioate oligonucleotides, 2-O-Me PS RNA) can also act in a sequence-specific manner to alter cell adhesion due to their protein interactive capabilities (2730). Phosphorothioates have a sulfur-for-oxygen atom substitution at the backbone phosphorous, which is similar in structure to the novel N3'
P5' thio-phosphoramidate oligonucleotide analogue GRN163L used in this study. GRN163L is a "hybrid" between phosphorothioates and phosphoramidate oligonucleotides because it contains a bridging nitrogen atom included in the backbone, which greatly enhances its hydrolytic stability in vitro. Indeed, when oligonucleotide N3'
P5' thio-phosphoramidates were first developed, the chemistry was designed to combine the attractive pharmacokinetic properties of the phosphorothioate protein interactive capabilities with the high RNA binding affinity of the phosphoramidates (12).
The ability of phosphorothioates to bind proteins is not completely understood; however, others have proposed two mechanisms to address the ability of various DNA oligonucleotides to bind to proteins. The first idea is that these highly sulfonated polyanionic molecules can bind in a sequence and length dependent or independent manner with numerous proteins that play key roles in cell adhesion, such as fibronectin, basic fibroblast growth factor, soluble CD4, HIV gp120, laminin, and several protein kinase C isoforms (29, 30). These DNA oligonucleotide-protein interactions are believed to occur via simple ionic and, possibly, covalent chemical bonding resulting from the attraction of the highly electronegative phosphorothioates to basic residues within the proteins in question (24). Our current data neither support nor negate this concept because we observed that oligonucleotides that lack the sulfur moiety in the backbone failed to alter cell adhesion, but the presence of the thio-containing backbone alone is not sufficient to alter cell adhesion (Table 1). It is noteworthy to mention that the unlipidated GRN163 did not alter adhesion in the same context as GRN163L, suggesting that lipidation and subsequent intracellular localization is important.
The second mechanism through which DNA oligonucleotides bind to proteins may be related to the contiguous deoxyguanosine residues within the sequence because it has been reported that antisense oligonucleotides that have four or more sequential deoxyguanosines can exert an unusual avidity for proteins (2730). It has also been proposed that G-rich oligonucleotides can form quadruple helices that interact with proteins; however, the mechanisms have not been extensively studied (26). Although it has been shown that G-rich constructs make better anti-cell adhesives, the G-quartet motif seemed necessary but not sufficient to produce an antiadhesive effect: a sequence of three or more deoxyguanosine residues is required to alter cell adhesion (Table 1), but only if palmitic or oleic groups are present.
Interestingly, GRN163L-treated cells seeded into wells coated with type I collagen (125 µg/mL) did not exhibit any differences in morphologic appearance, attachment efficiency, or cellular spreading when compared with mismatch-treated cells (Fig. 4). Similar results have also been reported for other compounds, such as fibronectin- and laminin-coated dishes. It was reported that a phosphorothioate antisense and sense oligonucleotide directed toward RelA inhibit the adhesion and spreading of K-Balb, MCF-7, and DU-145 cells (30). However, when these cells are seeded onto plates coated with fibronectin or laminin, the antiadhesive effects of the RelA oligonucleotides were abolished. These researchers also found that type IV collagen or vitronectin had no effect on the antiadhesive effect of the phosphorothioate oligonucleotide. According to the present study findings, type I collagen may interact with GRN163L or provide an alternative spreading surface that substitutes for these blocked by GRN163L, at least ex vivo (Fig. 4BD).
We also show that a single i.p. dose of GRN163L (15 mg/kg) can result in a reduction in the colonization of A549-luc cells into the lung (Fig. 5). This addresses the in vivo relevance of the present findings. We hypothesize that the ability of GRN163L to decrease cell attachment and spreading in vitro is recapitulated in vivo via a reduction in tumor cell seeding and also by a diminished tumor burden in experimental nude mouse models. Because GRN163L recently entered phase I/II clinical trials, it may be beneficial to take advantage of its antiadhesive action by administering the drug at the time of tumor biopsy or tumor-reductive surgery. It has been suggested that fine-needle aspiration may stimulate tumor dissemination through the needle track via the mechanical exfoliation of cancer cells (31). Thus, a single dose of GRN163L may have a therapeutic effect on any disseminated tumor cells to prevent the reattachment and recolonization and may possibly prevent malignant spread. Pleural carcinosis has been also been reported after the excision of malignant lung tumors (32, 33). Therefore, for minimal residual disease, postcytoreductive surgery, GRN163L may also be efficacious in reducing metastatic seeding from tumor cells.
| Acknowledgments |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
We thank Gregory Thompson, Michael Wang, Jennifer Costley, and Melissa Thompson for superb technical assistance; Angelina Contero and the Cancer Imaging Group for assistance with animal imaging studies; and Krisztina Pongracz and Daria Zielinska at Geron Corp. for oligonucleotide synthesis.
| Footnotes |
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Received 6/23/06. Revised 11/18/06. Accepted 12/ 1/06.
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P5' phosphoramidates as efficient telomerase inhibitors. Oncogene 2002;21:63842.[CrossRef][Medline]
P5' thio-phosphoramidate oligonucleotide, enhances the potency of telomerase inhibition. Oncogene 2005;24:52628.[CrossRef][Medline]
P5' thio-phosphoramidate (GRN163) targeting telomerase RNA in human multiple myeloma cells. Cancer Res 2003;63:618794.This article has been cited by other articles:
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