Table 3.

Association of the best haplotypes in each gene to CMT risk

GeneNSNPsBest PrawBest PBonf
BRCA224.8 × 10−62.6 × 10−4
BRCA151.5 × 10−40.0082
FGFR270.0191.0
TOX360.0251.0
CHEK250.0701.0
MAP3K120.0651.0
LSP1N.A.N.A.N.A.
RCAS150.191.0
TP53N.A.N.A.N.A.
ERBB230.201.0

NOTE: NSNPs, number of SNPs included in the haplotypes; Praw, the best χ2 haplotype P value obtained for each gene [nominal association (Praw < 0.05) is indicated in bold]; PBonf, Bonferroni corrected P values [significant association (PBonf < 0.05) is indicated in bold]; Ncases, 212; Ncontrols, 143.