Table 1

Ten most highly up-regulated genes in each cell line

Gene nameChromosome locationRatio
ZR-75-1-wt
MYBL2 a 20q13.15.7
FEN1 a 13q334.9
CDC25B 20p134.3
NME1 a 17q21.33.8
BRF1 a 14q14-q223.8
Topo II a 17q21-q223.4
RCH1 a 17q233.3
HepG2 a 1p31-p353.2
PAK2a3.0
OCLN a 5q12-q132.9
MCF7
H2AFZ a 4q245.4
MYBL2 a 20q13.14.9
TOPO II a 17q21-q224.7
GATA3 10p154.7
PRKACA 19p13.14.6
RCH1 a 17q234.5
OCLN a 5q12-q133.5
LAMNB2 19p133.3
GTF3A 13q12.3-q13.13.1
TMP21 14q24.33.0
SUM52
NERF a 417.2
TOPO II a 17q21-q2216.4
TAK1 6q14-q2112.6
CAS a 20q138.1
PTPRZ1 7q31.37.5
LIG3 17q11.2-q127.1
LAP18 1p35-36.16.7
GFAP 17q216.1
NDUFB7 19p135.5
EST 5.1
SKBR3
SDC1 a 2p24>50
PMI 17p12-q21>50
HLA-DQB1 a 6p21>50
Protein phosphatase 2Aβ5q32-q33>50
CAS a 20q13>50
MLP 1p34>50
MYBL2 a 20q13.1>50
Epidermal growth factor-like growth factor5q23>50
MAD 2p12-p13>50
CDK4 a 12q14>50
  • a Genes overexpressed in two or more cell lines.