Summary of SAGE library analyses
Librarya | Sequence | Tagsb | Unique tagsc | Genesd | ≥2 tagse |
---|---|---|---|---|---|
HOSE | 2,290 | 47,881 | 16,034 | 12,778 | 4,532 |
IOSE | 1,912 | 47,549 | 18,004 | 14,771 | 5,681 |
ML10 | 1,935 | 55,700 | 18,727 | 14,939 | 6,637 |
OVT6 | 2,104 | 41,620 | 18,476 | 15,646 | 4,799 |
OVT7 | 2,089 | 53,898 | 19,523 | 15,858 | 5,669 |
OVT8 | 2,076 | 32,494 | 16,363 | 14,153 | 3,815 |
OV1063 | 2,146 | 37,862 | 15,231 | 12,656 | 4,746 |
A2780 | 1,332 | 21,587 | 10,717 | 9,249 | 2,761 |
ES-2 | 1,775 | 35,352 | 14,739 | 12,335 | 3,952 |
POOL | 2,201 | 10,554 | 5,956 | 5,238 | 1,627 |
Total | 19,860 | 384,497 | 82,533 | 56,387 | 28,219 |
a The libraries are: HOSE, human ovarian surface epithelium from short-term culture; IOSE, SV40-immortalized ovarian surface epithelium; ML10, SV40-immortalized benign cystadenoma; OVT6, OVT7, and OVT8, primary ovarian serous adenocarcinomas; OV1063, A2780, and ES2, ovarian cancer cell lines; POOL, a pool of 10 ovarian cancer cell lines.
b Tag numbers after elimination of linker-based tags and duplicate ditags.
c Number of unique tags identified in each library.
d Number of genes identified after correction for sequencing errors.
e Number of genes represented at least twice.