Table 1

Summary of SAGE library analyses

LibraryaSequenceTagsbUnique tagscGenesd≥2 tagse
HOSE2,29047,88116,03412,7784,532
IOSE1,91247,54918,00414,7715,681
ML101,93555,70018,72714,9396,637
OVT62,10441,62018,47615,6464,799
OVT72,08953,89819,52315,8585,669
OVT82,07632,49416,36314,1533,815
OV10632,14637,86215,23112,6564,746
A27801,33221,58710,7179,2492,761
ES-21,77535,35214,73912,3353,952
POOL2,20110,5545,9565,2381,627
Total19,860384,49782,53356,38728,219
  • a The libraries are: HOSE, human ovarian surface epithelium from short-term culture; IOSE, SV40-immortalized ovarian surface epithelium; ML10, SV40-immortalized benign cystadenoma; OVT6, OVT7, and OVT8, primary ovarian serous adenocarcinomas; OV1063, A2780, and ES2, ovarian cancer cell lines; POOL, a pool of 10 ovarian cancer cell lines.

  • b Tag numbers after elimination of linker-based tags and duplicate ditags.

  • c Number of unique tags identified in each library.

  • d Number of genes identified after correction for sequencing errors.

  • e Number of genes represented at least twice.