Table 1

Genes differentially expressed in ovarian tumors as measured by the Ovachip

Up-regulated genes
 Insulin-like growth factor II (IGF2)NM_000612
 PTP receptor type (PTPRC)XM_016748
 Fms-related tyrosine kinase 1 (FLT1)XM_039993
 Heat-shock protein 90 kd α (HSP90)NM_074225
 Cyclin-dependent kinase 6 (CDK6)NM_001259
 Checkpoint suppressor 1 (CHES1)XM_007389
 RAB1, member RAS oncogene family (RAB1)XM_046674
 Cisplatin resistance-associated protein (CRA)XM_051918
 Nidogen (Enactin) (NID)XM_002042
 Orphan G protein-coupled receptor (RDC1)U67784
 Ras inhibitor (RIN1)NM_004292
 Transformation growth factor β 2 (TGFB2)XM_001754
 Laminin α 3 nicein (LAMA)NM_000227
 Carboxylesterase 2 (CES2)NM_003869
 Membrane metallo-endopeptidase (MME)XM_030171
 H4 (D10S170) Transforming sequenceXM_005753
 MutS Hormolog 3 (MSH3)XM_003992
 EST, similar to mu-type opioid receptorR31984
 Butyrate response factor 1 (BRF1)aNM_001519
 Throboxane A systhesis 1 (TBXAS1)NM_030984
 Nuclear factor I/X (NFIX)XM_057080
 E2F transcription factor 5 (E2F5)NM_001951
 Fc-γ receptor Illa (CD16)NM_000569
 Small proline rich protein 1 (SPRR1B)XM_096133
Down-regulated genes
 Forkhead box (FOXF1)XM_008078
 Ribosomal protein L7a (RPL7A)BC021979
 Basic transcription factor 3 (BTF3)NM_001202
 Mitogen-activated protein kinase 1 (MAPK1)XM_036967
 Lactate dehydrogenase A (LDHA)NM_005566
 β-tubulin (TUBB)aAF070561
 Breast Cancer 1, early onset (BRCA1)AF005068
 Nucleophosmin (NPM1)BC021983
 Threonyl tRNA synthtase (TARS)NM_064096
 Decay accelerating factor (DAF/CD55)XM_055716
Myosin light chain kinase (MYLK)XM_042186
  • a Up-regulated or down-regulated in colon tumors as well.