Table 4

Down-regulated genes in the transition from PIN to PC

Accession no.UniGene No. Hs.SymbolName
Function known
 AI827230374481 APCDD1 Adenomatosis polyposis coli down-regulated 1
 BF96525774120 APM2 Adipose specific 2
 AA156854114309 APOL1 Apolipoprotein L, 1
 NM_004024460 ATF3 Activating transcription factor 3
 M9434582422 CAPG Capping protein (actin filament), gelsolin-like
 AF035752139851 CAV2 Caveolin 2
 D1363975586 CCND2 Cyclin D2
 M1644589476 CD2 CD2 antigen (p50), sheep red blood cell receptor
 AI75003622116 CDC14B CDC14 cell division cycle 14 homolog B (Saccharomyces cerevisiae)
 AK021865173380 CKIP-1 CK2 interacting protein 1; HQ0024c protein
 X15880108885 COL6A1 Collagen, type VI, α1
 L16510297939 CTSB Cathepsin B
 U03688154654 CYP1B1 Cytochrome P450, family 1, subfamily B, polypeptide 1
 M6240182568 CYP27A1 Cytochrome P450, family 27, subfamily A, polypeptide 1
 X90579166079 CYP3A5P2 Cytochrome P450, family 3, subfamily A, polypeptide 5 pseudogene 2
 X93920180383 DUSP6 Dual specificity phosphatase 6
 NM_001421151139 ELF4 E74-like factor 4 (ets domain transcription factor)
 AF275945116651 EVA1 Epithelial V-like antigen 1
 AW30077061265 FAM3D Family with sequence similarity 3, member D
 D84239111732 FCGBP Fc fragment of IgG binding protein
 AF182316234680 FER1L3 fer-1-like 3, myoferlin (C. elegans)
 NM_00192480409 GADD45A Growth arrest and DNA-damage-inducible, α
 W919086079 GALNAC4S-6ST B cell RAG associated protein
 AA66611992287 GBP3 Guanylate binding protein 3
 NM_00016574471 GJA1 Gap junction protein, α1, 43 kDa (connexin 43)
 J0300477269 GNAI2 Guanine nucleotide binding protein (G protein), α inhibiting activity polypeptide 2
 J03817301961 GSTM1 Glutathione S-transferase M1
 M33906198253 HLA-DQA1 Major histocompatibility complex, class II, DQ α1
 NM_018950110309 HLA-F Major histocompatibility complex, class I, F
 U267261376 HSD11B2 Hydroxysteroid (11-β) dehydrogenase 2
 BF793633180919 ID2 Inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
 AV64661034853 ID4 Inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
 M1539583968 ITGB2 Integrin, β2
 U2513893841 KCNMB1 Potassium large conductance calcium-activated channel, subfamily M, β member 1
 AB012955129867 KIP2 DNA-dependent protein kinase catalytic subunit-interacting protein 2
 X7276090291 LAMB2 Laminin, β2 (laminin S)
 Y00711234489 LDHB Lactate dehydrogenase B
 M36682621 LGALS3 Lectin, galactoside-binding, soluble, 3 (galectin 3)
 L1321079339 LGALS3BP Lectin, galactoside-binding, soluble, 3 binding protein
 X03444377973 LMNA Lamin A/C
 AA7797097457 MAGE-E1 MAGE-E1 protein
 L0889578995 MEF2C MADS box transcription enhancer factor 2, polypeptide C
 AF017418104105 MEIS2 Meis1, myeloid ecotropic viral integration site 1 homolog 2 (mouse)
 AF203032198760 NEFH Neurofilament, heavy polypeptide 200 kDa
 M1226775485 OAT Ornithine aminotransferase (gyrate atrophy)
 AW051593189999 P2RY5 Purinergic receptor P2Y, G-protein coupled, 5
 BG02857364056 PAK1 p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast)
 BF9693558364 PDK4 Pyruvate dehydrogenase kinase, isoenzyme 4
 AA253194303125 PIGPC1 p53-induced protein PIGPC1
 M2243076422 PLA2G2A Phospholipase A2, group IIA (platelets, synovial fluid)
 D0024477274 PLAU Plasminogen activator, urokinase
 X56134297753 RPLP2 Ribosomal protein, large P2
 W73992132792 SDCCAG43 Serologically defined colon cancer antigen 43
 AW96578966450 SENP1 Sentrin/SUMO-specific protease
 AF029082184510 SFN Stratifin
 U4440375367 SLA Src-like-adaptor
 AV705470380991 SNF1LK SNF1-like kinase
 Y08110101657 SORL1 Sortilin-related receptor, L(DLR class) A repeats-containing
 BE439695160483 STOM Stomatin
 AB04264694785 TGIF2 TGFB-induced factor 2 (TALE family homeobox)
 NM_0032412387 TGM4 Transglutaminase 4 (prostate)
 U2184782173 TIEG TGFB inducible early growth response
 M126705831 TIMP1 Tissue inhibitor of metalloproteinase 1
 AA8370029741 TJP4 Tight junction protein 4 (peripheral)
 M3525284072 TM4SF3 Transmembrane 4 superfamily member 3
 M1930973980 TNNT1 Troponin T1, skeletal, slow
 W72411137569 TP73L Tumor protein p73-like
 H99016171501 USP11 Ubiquitin specific protease 11
 AF07719774669 VAMP5 Vesicle-associated membrane protein 5 (myobrevin)
 AW137980115659 VIK vav-1 interacting Kruppel-like protein
 D88154103665 VILL Villin-like
 M92843343586 ZFP36 Zinc finger protein 36, C3H type, homolog (mouse)
 BF055342326801 ZNF6 Zinc finger protein 6 (CMPX1)
Function unknown
 AI769569112472 ESTs
 AW510657156044 ESTs
 BF11181921470 ESTs
 T79422119237 ESTs
 AI30486212867 ESTs