Comparison of ORs for 17q SNPs tested in the University of Michigan, Gudmundsson et al., and the Cancer Genetic Markers of Susceptibility studies
dbSNP ID | Risk allele | UM * | Gudmundsson et al. † | CGEMS ‡ | |||
---|---|---|---|---|---|---|---|
OR (95% CI) | P | OR (95% CI) | P | OR (95% CI) | P | ||
rs4430796 | A | 1.40 (1.09–1.81) | 0.009 | 1.20 (1.11–1.31) | <0.001 | 1.17 (1.04–1.31) | 0.009 |
rs7501939 | C | 1.44 (1.10–1.89) | 0.008 | 1.17 (1.08–1.27) | <0.001 | 1.19 (1.06–1.34) | 0.004 |
rs1859962 | G | 1.21 (0.94–1.56) | 0.132 | 1.16 (1.07–1.26) | <0.001 | 1.19 (1.06–1.34) | 0.003 |
NOTE: ORs were computed under an additive genetic model.
Abbreviations: UM, University of Michigan; CGEMS, Cancer Genetic Markers of Susceptibility.
↵* Before conducting the conditional logistic regression analyses, we excluded 38 men (from 10 families) who were not brothers of the index case, resulting in a reduced sample size of 977 men and 604 discordant sibling pairs.
↵† Logistic regression as reported by Gudmundsson et al. ( 7), all samples combined (1,501 cases and 11,289 controls).
↵‡ Logistic regression, unadjusted for covariates (1,155 cases and 1,106 controls).