Table 3.

HLA-A*0201 epitopes identified by algorithm

SYFPEITHINetMHCBIMASRANKPEPAve
Total epitopes241169128189182
Epitopes in CAN genes4730203332
CRC: ≥1 epitope1111111011
BC: ≥1 epitope1111111111
Per sample: CRC8.26.75.06.56.6
    : BC13.68.76.710.79.9
    : CRC+BC10.97.75.88.68.3
Per peptide: CRC0.110.090.070.090.09
    : BC0.150.100.070.120.11
    : CRC+BC0.130.090.070.110.10
Cleaved at COOH terminal44%38%48%50%45%